Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU6-1041P-201ENST00000516254 102 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF40AO75400 MIR3144-201ENST00000579460 79 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 MIR3133-201ENST00000583157 78 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 U6.73-201ENST00000619194 103 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF40AO75400 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF40AO75400 AL365361.1-201ENST00000566942 3481 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 Y_RNA.441-201ENST00000384123 112 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 RNU6-1072P-201ENST00000384703 107 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 RNU6-443P-201ENST00000384780 107 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 RNU6-578P-201ENST00000390980 103 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 RNU6-1186P-201ENST00000410429 97 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.26□□□□□ -1.89
PRPF40AO75400 RNU7-26P-201ENST00000458980 63 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF40AO75400 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.26□□□□□ -1.89
PRPF40AO75400 AC026271.5-201ENST00000577873 130 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 AL391903.3-201ENST00000612158 163 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.26□□□□□ -1.89
PRPF40AO75400 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF40AO75400 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PRPF40AO75400 Y_RNA.170-201ENST00000363746 110 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 Y_RNA.229-201ENST00000364347 113 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 SNORA72-201ENST00000384339 132 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 Y_RNA.506-201ENST00000384494 102 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 MIR1262-201ENST00000408276 93 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 RNU6-1135P-201ENST00000411083 103 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 RNU5E-9P-201ENST00000411164 104 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 EBAG9P1-201ENST00000418955 543 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 AC022018.1-201ENST00000430685 241 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.25□□□□□ -1.89
PRPF40AO75400 RPS15AP28-201ENST00000435088 386 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 SEPT7P4-201ENST00000437076 306 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 AL353689.1-201ENST00000438895 199 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 AC007229.1-201ENST00000590455 412 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 AC108706.1-201ENST00000611053 297 ntBASIC3.25□□□□□ -1.89
PRPF40AO75400 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF40AO75400 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PRPF40AO75400 SNORA38-201ENST00000363946 132 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 Y_RNA.272-201ENST00000364696 102 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 RNU6-851P-201ENST00000384565 107 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 RNU11-5P-201ENST00000391216 129 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 RNU6-394P-201ENST00000410735 107 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.24□□□□□ -1.89
PRPF40AO75400 RNU1-131P-201ENST00000458943 161 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 AC005840.1-201ENST00000498412 377 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 RNU6-453P-201ENST00000516819 85 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 LARP7P3-201ENST00000579888 337 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 MIR3605-201ENST00000583214 100 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 Z82195.2-201ENST00000612348 18351 ntBASIC3.24□□□□□ -1.89
PRPF40AO75400 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PRPF40AO75400 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF40AO75400 RNU1-91P-201ENST00000364746 163 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.23□□□□□ -1.89
PRPF40AO75400 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 RN7SKP284-201ENST00000411002 343 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 COTL1P1-201ENST00000422309 375 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 ATP5J2P3-201ENST00000451550 258 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 SCARNA8-201ENST00000515924 131 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 SCARNA13-201ENST00000516672 275 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.23□□□□□ -1.89
PRPF40AO75400 AC109810.1-201ENST00000534066 224 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 AL359075.3-201ENST00000613288 217 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 AP006437.1-201ENST00000641440 3685 ntBASIC3.23□□□□□ -1.89
PRPF40AO75400 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF40AO75400 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF40AO75400 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF40AO75400 SNORD114-6-201ENST00000364393 72 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 RNU4-41P-201ENST00000364426 143 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 Y_RNA.398-201ENST00000383952 99 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 RNU6-125P-201ENST00000384505 107 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AL512604.1-201ENST00000404812 257 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 RPS4XP11-201ENST00000446897 772 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 ZNF861P-201ENST00000588126 639 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AC073413.2-201ENST00000604332 360 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AC093732.2-201ENST00000607950 274 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AL353149.1-201ENST00000610667 244 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF40AO75400 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PRPF40AO75400 AC009487.2-201ENST00000420969 6821 ntBASIC3.22□□□□□ -1.89
PRPF40AO75400 AC096644.4-201ENST00000563417 2912 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PRPF40AO75400 SNORD115-3-201ENST00000363100 82 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 RNU6-674P-201ENST00000363831 107 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 SNORD116-18-201ENST00000383961 92 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 MIR634-201ENST00000385208 97 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 MT-TT-201ENST00000387460 66 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF40AO75400 AL392103.1-201ENST00000447000 198 ntBASIC3.21□□□□□ -1.9
PRPF40AO75400 AL121914.1-201ENST00000450188 156 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms