Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AL158211.1-201ENST00000566763 763 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MIR3611-201ENST00000584484 83 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 MIR6079-201ENST00000635807 62 ntBASIC0.64□□□□□ -2.31
NPHP4O75161 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
NPHP4O75161 RNU6-1119P-201ENST00000384349 108 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 Y_RNA.481-201ENST00000384373 102 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 MTCO3P40-201ENST00000392516 676 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.63□□□□□ -2.31
NPHP4O75161 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.63□□□□□ -2.31
NPHP4O75161 AC091021.1-201ENST00000468051 388 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 AP000870.1-201ENST00000472927 406 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.63□□□□□ -2.31
NPHP4O75161 RNU7-12P-201ENST00000516030 62 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 AP003327.1-201ENST00000529684 127 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 AL512360.1-201ENST00000555346 234 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 AL117336.2-201ENST00000602435 335 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 AP000770.2-201ENST00000623694 100 ntBASIC0.63□□□□□ -2.31
NPHP4O75161 Y_RNA.77-201ENST00000362962 107 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 Y_RNA.184-201ENST00000363884 108 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 RNU6-128P-201ENST00000383976 107 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 RNU6-306P-201ENST00000384617 107 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 MIR10B-201ENST00000385011 110 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 SNORD12-201ENST00000391002 90 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 SNORA75.2-201ENST00000391138 150 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 SNORA75.3-201ENST00000391231 150 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 MTCO3P18-201ENST00000440206 761 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 snoU13.25-201ENST00000458945 104 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 OR9P1P-201ENST00000496431 281 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 RNU7-172P-201ENST00000517125 64 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 RNU6-1116P-201ENST00000517269 99 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 SNORA28-201ENST00000606769 126 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 AC019193.3-201ENST00000609144 554 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 AC124864.2-201ENST00000624736 186 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 MIR3974-201ENST00000637126 96 ntBASIC0.62□□□□□ -2.31
NPHP4O75161 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
NPHP4O75161 SNORA1B-201ENST00000362535 133 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 RNA5SP361-201ENST00000362686 118 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
NPHP4O75161 AC022493.2-201ENST00000506122 481 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 AC097462.1-201ENST00000514125 324 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 ACA59.1-201ENST00000515966 143 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 Y_RNA.693-201ENST00000516641 110 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 RNU2-56P-201ENST00000516826 190 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 MIR3672-201ENST00000584290 82 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 AC010620.1-201ENST00000601088 1102 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 AL138726.1-201ENST00000614873 333 ntBASIC0.61□□□□□ -2.31
NPHP4O75161 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
NPHP4O75161 RNU6-280P-201ENST00000364145 104 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 SNORA2.2-201ENST00000365473 135 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RNU6-483P-201ENST00000384088 108 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 Y_RNA.533-201ENST00000384596 114 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RNU2-66P-201ENST00000410650 161 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 MTATP6P13-201ENST00000438531 667 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RPL39P39-201ENST00000455840 151 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 AC018710.1-201ENST00000506509 158 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 AC010598.1-201ENST00000510378 103 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 RNU6-1291P-201ENST00000516591 104 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.6□□□□□ -2.31
NPHP4O75161 AC010999.1-201ENST00000611856 324 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 AC068137.3-201ENST00000639191 341 ntBASIC0.6□□□□□ -2.31
NPHP4O75161 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
NPHP4O75161 RNU6-407P-201ENST00000365280 104 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 Y_RNA.405-201ENST00000383979 100 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 RNU6-259P-201ENST00000383999 107 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 Y_RNA.451-201ENST00000384200 100 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 SNORA20B-201ENST00000384220 132 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 Y_RNA.524-201ENST00000384564 100 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 Y_RNA.561-201ENST00000384694 100 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 RNU2-64P-201ENST00000411315 191 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 RNU7-21P-201ENST00000459430 62 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.59□□□□□ -2.31
NPHP4O75161 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.59□□□□□ -2.31
NPHP4O75161 AC093303.1-201ENST00000514549 295 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 PIGPP4-201ENST00000584447 307 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 Z99129.1-201ENST00000612510 255 ntBASIC0.59□□□□□ -2.31
NPHP4O75161 RNU6-1335P-201ENST00000365426 107 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
NPHP4O75161 MIR200A-201ENST00000384875 90 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 MIR526A1-201ENST00000384897 85 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 SEPT14P3-201ENST00000439401 183 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 RPEP5-201ENST00000441137 268 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 AL732372.2-207ENST00000445840 183 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 SEPT14P2-201ENST00000453405 183 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 RNU7-66P-201ENST00000459469 62 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 SEPT14P4-201ENST00000513445 186 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 RNU6-1281P-201ENST00000516223 105 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 RNU6-256P-201ENST00000516747 97 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 FO082796.1-201ENST00000523795 183 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.58□□□□□ -2.32
NPHP4O75161 PRELID3BP2-201ENST00000605362 201 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 AL359880.1-201ENST00000621879 266 ntBASIC0.58□□□□□ -2.32
NPHP4O75161 MIRLET7C-201ENST00000362160 84 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms