Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPNE3O75131 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPNE3O75131 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPNE3O75131 Y_RNA.91-201ENST00000363042 107 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU6-915P-201ENST00000364943 103 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU6-160P-201ENST00000384591 107 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU6-1072P-201ENST00000384703 107 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU6-443P-201ENST00000384780 107 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 MIR627-201ENST00000384979 97 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 Y_RNA.629-201ENST00000411368 105 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 ATP5J2P3-201ENST00000451550 258 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU6-1291P-201ENST00000516591 104 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 RNU1-142P-201ENST00000516682 145 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.21□□□□□ -1.9
CPNE3O75131 AL359881.1-201ENST00000602916 267 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 MIR7112-201ENST00000616126 65 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 AL449363.1-201ENST00000617815 186 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 U4atac.1-201ENST00000618345 95 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 AC068647.1-201ENST00000489539 2265 ntBASIC3.21□□□□□ -1.9
CPNE3O75131 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE3O75131 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE3O75131 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CPNE3O75131 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE3O75131 RNU6-80P-201ENST00000384195 107 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 RNA5SP323-201ENST00000391094 133 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE3O75131 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE3O75131 RNU1-131P-201ENST00000458943 161 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 RNU6-126P-201ENST00000516685 103 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 SNORA70.19-201ENST00000516717 90 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE3O75131 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 MIR4662B-201ENST00000579498 81 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 AC097639.2-201ENST00000603159 172 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 YPEL5P2-201ENST00000605553 359 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 MIR6079-201ENST00000635807 62 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
CPNE3O75131 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE3O75131 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE3O75131 Y_RNA.267-201ENST00000364679 109 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 RNU6-1138P-201ENST00000365359 106 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 MIR1262-201ENST00000408276 93 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 HMGN1P7-201ENST00000491722 313 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 YWHAEP4-201ENST00000505390 198 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 RNU4-57P-201ENST00000515980 135 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 AC005000.2-201ENST00000605468 310 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 AC018630.2-201ENST00000534866 2403 ntBASIC3.19□□□□□ -1.9
CPNE3O75131 AC245060.5-201ENST00000610778 3293 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPNE3O75131 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.18□□□□□ -1.9
CPNE3O75131 AC018634.1-201ENST00000437554 401 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
CPNE3O75131 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.18□□□□□ -1.9
CPNE3O75131 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
CPNE3O75131 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 AC022149.2-201ENST00000621061 203 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 U6.108-201ENST00000637764 58 ntBASIC3.18□□□□□ -1.9
CPNE3O75131 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE3O75131 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE3O75131 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE3O75131 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE3O75131 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE3O75131 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 SNORA33-201ENST00000363664 130 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 Y_RNA.253-201ENST00000364562 112 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 SNRPGP10-201ENST00000432323 225 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 RNU6-341P-201ENST00000516973 96 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
CPNE3O75131 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE3O75131 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CPNE3O75131 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CPNE3O75131 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.16□□□□□ -1.9
CPNE3O75131 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE3O75131 ZNF271P-202ENST00000465539 1970 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CPNE3O75131 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE3O75131 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPNE3O75131 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.16□□□□□ -1.9
CPNE3O75131 Y_RNA.486-201ENST00000384398 107 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 SNORA8-201ENST00000384574 139 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 MIR515-2-201ENST00000384883 83 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 MIR515-1-201ENST00000384884 83 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CPNE3O75131 NDUFB4P4-201ENST00000404822 243 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 NDUFA4P2-201ENST00000489989 244 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
CPNE3O75131 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms