Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC073349.3-201ENST00000617616 186 ntBASIC2.1□□□□□ -2.07
LDB3O75112 MIR1248-201ENST00000629190 106 ntBASIC2.1□□□□□ -2.07
LDB3O75112 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LDB3O75112 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LDB3O75112 Y_RNA.172-201ENST00000363765 102 ntBASIC2.09□□□□□ -2.07
LDB3O75112 RNU6-324P-201ENST00000363957 106 ntBASIC2.09□□□□□ -2.07
LDB3O75112 RNU4-10P-201ENST00000364383 140 ntBASIC2.09□□□□□ -2.07
LDB3O75112 SNORA26.5-201ENST00000391215 123 ntBASIC2.09□□□□□ -2.07
LDB3O75112 MIR300-201ENST00000401138 83 ntBASIC2.09□□□□□ -2.07
LDB3O75112 AL031003.1-201ENST00000404229 172 ntBASIC2.09□□□□□ -2.07
LDB3O75112 RNU2-48P-201ENST00000410694 191 ntBASIC2.09□□□□□ -2.07
LDB3O75112 RNU5E-9P-201ENST00000411164 104 ntBASIC2.09□□□□□ -2.07
LDB3O75112 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.07
LDB3O75112 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
LDB3O75112 AC104465.1-201ENST00000611365 139 ntBASIC2.09□□□□□ -2.07
LDB3O75112 AL590808.1-201ENST00000618696 141 ntBASIC2.09□□□□□ -2.07
LDB3O75112 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
LDB3O75112 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LDB3O75112 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LDB3O75112 SNORD31B-201ENST00000364977 69 ntBASIC2.08□□□□□ -2.08
LDB3O75112 Y_RNA.304-201ENST00000365011 112 ntBASIC2.08□□□□□ -2.08
LDB3O75112 RNU6-746P-201ENST00000384112 109 ntBASIC2.08□□□□□ -2.08
LDB3O75112 Y_RNA.572-201ENST00000384757 98 ntBASIC2.08□□□□□ -2.08
LDB3O75112 AL357139.1-201ENST00000407792 426 ntBASIC2.08□□□□□ -2.08
LDB3O75112 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
LDB3O75112 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
LDB3O75112 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
LDB3O75112 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.08□□□□□ -2.08
LDB3O75112 ATP5EP1-201ENST00000510257 156 ntBASIC2.08□□□□□ -2.08
LDB3O75112 SUMO2P18-201ENST00000518873 252 ntBASIC2.08□□□□□ -2.08
LDB3O75112 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
LDB3O75112 MRPS18CP4-201ENST00000535821 231 ntBASIC2.08□□□□□ -2.08
LDB3O75112 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.08□□□□□ -2.08
LDB3O75112 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.08□□□□□ -2.08
LDB3O75112 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
LDB3O75112 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
LDB3O75112 AC009127.3-201ENST00000570531 403 ntBASIC2.08□□□□□ -2.08
LDB3O75112 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
LDB3O75112 AL049779.4-201ENST00000604500 156 ntBASIC2.08□□□□□ -2.08
LDB3O75112 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
LDB3O75112 FO624990.1-201ENST00000636373 85 ntBASIC2.08□□□□□ -2.08
LDB3O75112 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
LDB3O75112 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LDB3O75112 AC134026.1-201ENST00000623249 2239 ntBASIC2.07□□□□□ -2.08
LDB3O75112 Y_RNA.8-201ENST00000362353 102 ntBASIC2.07□□□□□ -2.08
LDB3O75112 Y_RNA.124-201ENST00000363339 93 ntBASIC2.07□□□□□ -2.08
LDB3O75112 RNU6-1310P-201ENST00000384153 107 ntBASIC2.07□□□□□ -2.08
LDB3O75112 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.07□□□□□ -2.08
LDB3O75112 RNU6-1135P-201ENST00000411083 103 ntBASIC2.07□□□□□ -2.08
LDB3O75112 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
LDB3O75112 HMGN2P18-201ENST00000450680 270 ntBASIC2.07□□□□□ -2.08
LDB3O75112 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
LDB3O75112 HMGN2P9-201ENST00000476875 229 ntBASIC2.07□□□□□ -2.08
LDB3O75112 SNORA4.4-201ENST00000515921 135 ntBASIC2.07□□□□□ -2.08
LDB3O75112 RNU6-667P-201ENST00000517186 102 ntBASIC2.07□□□□□ -2.08
LDB3O75112 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.07□□□□□ -2.08
LDB3O75112 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
LDB3O75112 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.07□□□□□ -2.08
LDB3O75112 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.07□□□□□ -2.08
LDB3O75112 AC072026.1-201ENST00000605023 201 ntBASIC2.07□□□□□ -2.08
LDB3O75112 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
LDB3O75112 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
LDB3O75112 AC008873.1-201ENST00000625051 138 ntBASIC2.07□□□□□ -2.08
LDB3O75112 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LDB3O75112 U6.115-201ENST00000636045 103 ntBASIC2.07□□□□□ -2.08
LDB3O75112 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.07□□□□□ -2.08
LDB3O75112 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.07□□□□□ -2.08
LDB3O75112 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LDB3O75112 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
LDB3O75112 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
LDB3O75112 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
LDB3O75112 Y_RNA.240-201ENST00000364469 95 ntBASIC2.06□□□□□ -2.08
LDB3O75112 Y_RNA.243-201ENST00000364481 109 ntBASIC2.06□□□□□ -2.08
LDB3O75112 RNU6-818P-201ENST00000364837 108 ntBASIC2.06□□□□□ -2.08
LDB3O75112 RNU6-438P-201ENST00000365561 103 ntBASIC2.06□□□□□ -2.08
LDB3O75112 SNORA19-201ENST00000384737 128 ntBASIC2.06□□□□□ -2.08
LDB3O75112 MIR586-201ENST00000385035 97 ntBASIC2.06□□□□□ -2.08
LDB3O75112 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
LDB3O75112 MIR1283-1-201ENST00000408494 87 ntBASIC2.06□□□□□ -2.08
LDB3O75112 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
LDB3O75112 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LDB3O75112 RNU6-1278P-201ENST00000516130 107 ntBASIC2.06□□□□□ -2.08
LDB3O75112 SNORA31.11-201ENST00000516528 139 ntBASIC2.06□□□□□ -2.08
LDB3O75112 RNA5SP137-201ENST00000516833 135 ntBASIC2.06□□□□□ -2.08
LDB3O75112 RNA5SP490-201ENST00000517141 136 ntBASIC2.06□□□□□ -2.08
LDB3O75112 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB3O75112 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB3O75112 AC091544.4-201ENST00000555268 342 ntBASIC2.06□□□□□ -2.08
LDB3O75112 MIR3910-1-201ENST00000580936 111 ntBASIC2.06□□□□□ -2.08
LDB3O75112 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB3O75112 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
LDB3O75112 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LDB3O75112 ZNF720P1-201ENST00000562403 1939 ntBASIC2.05□□□□□ -2.08
LDB3O75112 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LDB3O75112 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.05□□□□□ -2.08
LDB3O75112 Y_RNA.361-201ENST00000365515 120 ntBASIC2.05□□□□□ -2.08
LDB3O75112 Y_RNA.398-201ENST00000383952 99 ntBASIC2.05□□□□□ -2.08
LDB3O75112 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
LDB3O75112 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
LDB3O75112 RNU6-394P-201ENST00000410735 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms