Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 AC023141.11-201ENST00000508864 202 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 RNY3P16-201ENST00000516338 101 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 RNA5SP82-201ENST00000516707 92 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 RNU6-182P-201ENST00000516970 105 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
LMX1BO60663 AL512605.2-201ENST00000592972 256 ntBASIC1.97□□□□□ -2.09
LMX1BO60663 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LMX1BO60663 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
LMX1BO60663 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
LMX1BO60663 SNORD114-1-201ENST00000362705 72 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 RNU6-653P-201ENST00000363074 106 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 Y_RNA.150-201ENST00000363562 102 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 Y_RNA.172-201ENST00000363765 102 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 RNU6-211P-201ENST00000384047 107 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 RNU6-886P-201ENST00000384319 105 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 SNORA80E-201ENST00000384744 137 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 RNU6-918P-201ENST00000391219 106 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 MIR300-201ENST00000401138 83 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AC016909.1-201ENST00000415916 166 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AL161788.1-201ENST00000441805 169 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AC016717.1-201ENST00000448918 286 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 HMGN2P18-201ENST00000450680 270 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 U8.19-201ENST00000459095 133 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 RNU7-57P-201ENST00000459540 60 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.96□□□□□ -2.1
LMX1BO60663 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.96□□□□□ -2.1
LMX1BO60663 AC090616.3-201ENST00000582184 217 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.96□□□□□ -2.1
LMX1BO60663 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 AC073349.3-201ENST00000617616 186 ntBASIC1.96□□□□□ -2.1
LMX1BO60663 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.96□□□□□ -2.1
LMX1BO60663 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LMX1BO60663 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LMX1BO60663 Y_RNA.124-201ENST00000363339 93 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU6-682P-201ENST00000363843 106 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 Y_RNA.180-201ENST00000363867 113 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 Y_RNA.304-201ENST00000365011 112 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 Y_RNA.310-201ENST00000365063 113 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU6-763P-201ENST00000390865 106 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 SNORA26.5-201ENST00000391215 123 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU2-32P-201ENST00000411193 191 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 SUMO1P3-201ENST00000439961 304 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 MTCO1P44-201ENST00000441935 243 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AC011753.1-201ENST00000451001 220 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AL138752.1-201ENST00000452964 351 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU7-120P-201ENST00000459334 63 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 RNU6-221P-201ENST00000459541 99 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AC022559.1-201ENST00000520905 205 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1BO60663 AC024405.2-202ENST00000532731 184 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AC022616.8-201ENST00000533569 253 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 MIR4308-201ENST00000580634 81 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AC006380.1-201ENST00000603598 186 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AL356280.1-201ENST00000603614 379 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 AL365434.2-201ENST00000607979 234 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 MIR5739-201ENST00000619803 80 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
LMX1BO60663 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LMX1BO60663 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
LMX1BO60663 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1BO60663 MIRLET7G-201ENST00000362280 84 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 RNU6-324P-201ENST00000363957 106 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 RNU6-546P-201ENST00000383991 107 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 SNORD14D-201ENST00000384390 87 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 SNORD65B-201ENST00000459126 73 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1BO60663 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.94□□□□□ -2.1
LMX1BO60663 Y_RNA.679-201ENST00000516416 91 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 SNORA48.11-201ENST00000517015 89 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.94□□□□□ -2.1
LMX1BO60663 AC136628.3-201ENST00000521868 290 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1BO60663 MIR5007-201ENST00000583098 95 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1BO60663 AL078604.3-201ENST00000615580 211 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 AL365265.1-201ENST00000621045 234 ntBASIC1.94□□□□□ -2.1
LMX1BO60663 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1BO60663 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1BO60663 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1BO60663 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1BO60663 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
LMX1BO60663 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1BO60663 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 Y_RNA.368-201ENST00000365547 113 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 RNU6-1062P-201ENST00000383908 107 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 RNU6-418P-201ENST00000384035 107 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 SNORA20B-201ENST00000384220 132 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 MIR524-201ENST00000385242 87 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LMX1BO60663 Y_RNA.793-201ENST00000411222 111 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 COX6CP10-201ENST00000416832 224 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 AC010531.2-201ENST00000465012 153 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 AC093259.1-201ENST00000509755 300 ntBASIC1.93□□□□□ -2.1
LMX1BO60663 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms