Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.93□□□□□ -2.1
ZIC3O60481 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
ZIC3O60481 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
ZIC3O60481 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZIC3O60481 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZIC3O60481 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC3O60481 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZIC3O60481 MIR335-201ENST00000362173 94 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 RNU6-324P-201ENST00000363957 106 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 Y_RNA.237-201ENST00000364439 102 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 MIR1253-201ENST00000408273 105 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZIC3O60481 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 AC099677.2-201ENST00000436385 175 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
ZIC3O60481 SNORD127-201ENST00000458892 86 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 RNU2-31P-201ENST00000516954 155 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 AP005660.1-201ENST00000522972 293 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
ZIC3O60481 MIR3145-201ENST00000580727 82 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 AC104984.5-201ENST00000586878 94 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.92□□□□□ -2.1
ZIC3O60481 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
ZIC3O60481 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
ZIC3O60481 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC3O60481 AL391987.6-201ENST00000305671 199 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNU6-862P-201ENST00000362804 105 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNU6-271P-201ENST00000363858 105 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNU1-96P-201ENST00000364163 162 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 Y_RNA.288-201ENST00000364854 92 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNU6-702P-201ENST00000364982 107 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNU6-505P-201ENST00000384427 107 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 MTCO1P5-201ENST00000433573 344 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RPS26P55-201ENST00000471178 356 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 SERF1AP1-201ENST00000514575 187 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 SNORA70.12-201ENST00000516084 153 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 AC023157.2-201ENST00000540596 141 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 AL137100.2-201ENST00000555786 315 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 AC004817.2-201ENST00000561794 651 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 U6.73-201ENST00000619194 103 ntBASIC1.91□□□□□ -2.1
ZIC3O60481 MIRLET7G-201ENST00000362280 84 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 RNU4-80P-201ENST00000363200 141 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 MIR4438-201ENST00000585271 93 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 AC005336.3-201ENST00000623833 2679 ntBASIC1.9□□□□□ -2.11
ZIC3O60481 SNORA33-201ENST00000363664 130 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU6-407P-201ENST00000365280 104 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ZIC3O60481 RNA5SP467-201ENST00000391274 118 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU2-38P-201ENST00000410856 79 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 AL135790.2-201ENST00000437701 267 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 HSPE1P13-201ENST00000451143 297 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU6-1132P-201ENST00000459214 107 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU6-191P-201ENST00000516295 94 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 SCARNA24.2-201ENST00000516968 130 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 AC012433.1-201ENST00000588916 398 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 AC062037.2-201ENST00000610137 73 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 U6.108-201ENST00000637764 58 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 ZNF720P1-201ENST00000562403 1939 ntBASIC1.89□□□□□ -2.11
ZIC3O60481 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ZIC3O60481 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.88□□□□□ -2.11
ZIC3O60481 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
ZIC3O60481 Y_RNA.172-201ENST00000363765 102 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 RNU6-117P-201ENST00000365415 107 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 Y_RNA.562-201ENST00000384695 113 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 RNU6-710P-201ENST00000410424 105 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.88□□□□□ -2.11
ZIC3O60481 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 MTND4LP30-201ENST00000454092 297 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.88□□□□□ -2.11
ZIC3O60481 AC097462.1-201ENST00000514125 324 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.88□□□□□ -2.11
ZIC3O60481 RPL21P9-201ENST00000556149 474 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.88□□□□□ -2.11
ZIC3O60481 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms