Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR194-1-201ENST00000384892 85 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.3□□□□□ -2.2
LCMT2O60294 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 SDAD1P3-201ENST00000427380 333 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
LCMT2O60294 MRPS10P1-201ENST00000448483 130 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 SNORD19B-201ENST00000459623 84 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RPS27P22-201ENST00000478056 241 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU7-99P-201ENST00000516271 62 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.3□□□□□ -2.2
LCMT2O60294 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.3□□□□□ -2.2
LCMT2O60294 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 MIR3674-201ENST00000636576 68 ntBASIC1.3□□□□□ -2.2
LCMT2O60294 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LCMT2O60294 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 SNORA12.1-201ENST00000390873 148 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 MRPL35P1-201ENST00000404272 572 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 Y_RNA.605-201ENST00000410577 105 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.29□□□□□ -2.2
LCMT2O60294 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.29□□□□□ -2.2
LCMT2O60294 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 RNU7-152P-201ENST00000458982 64 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 RNU6-408P-201ENST00000515910 100 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 RNU7-4P-201ENST00000516961 62 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 MIR2355-201ENST00000517199 87 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.29□□□□□ -2.2
LCMT2O60294 MIR4709-201ENST00000577272 72 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 AC133104.2-201ENST00000615272 193 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 U6.115-201ENST00000636045 103 ntBASIC1.29□□□□□ -2.2
LCMT2O60294 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LCMT2O60294 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
LCMT2O60294 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 Y_RNA.463-201ENST00000384271 102 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LCMT2O60294 COX6CP10-201ENST00000416832 224 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AF228730.4-201ENST00000421457 183 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 MTATP6P23-201ENST00000440153 476 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.28□□□□□ -2.2
LCMT2O60294 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.28□□□□□ -2.2
LCMT2O60294 RNU7-34P-201ENST00000459394 64 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.28□□□□□ -2.2
LCMT2O60294 AC144568.1-201ENST00000520139 137 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AL442163.3-201ENST00000554110 156 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 MIR4498-201ENST00000577599 66 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 Y_RNA.804-201ENST00000615262 101 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AC011476.5-201ENST00000615594 130 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 AC104985.2-201ENST00000620598 500 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 MIR8054-201ENST00000620877 86 ntBASIC1.28□□□□□ -2.2
LCMT2O60294 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LCMT2O60294 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LCMT2O60294 SNORA27.1-201ENST00000362604 124 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 RNU1-22P-201ENST00000363334 158 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 Y_RNA.124-201ENST00000363339 93 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 Y_RNA.187-201ENST00000363918 113 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 Y_RNA.496-201ENST00000384444 101 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 RNA5SP475-201ENST00000410568 110 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 MTCO2P27-201ENST00000420740 428 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.27□□□□□ -2.21
LCMT2O60294 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AL163540.1-201ENST00000485382 386 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.27□□□□□ -2.21
LCMT2O60294 AC097462.1-201ENST00000514125 324 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AC023442.1-201ENST00000531247 422 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AL390123.1-201ENST00000603216 237 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AC021506.2-201ENST00000612354 169 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 U2.1-201ENST00000618978 145 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 AC006435.5-201ENST00000624486 112 ntBASIC1.27□□□□□ -2.21
LCMT2O60294 RNU6-1115P-201ENST00000362490 106 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNU4-73P-201ENST00000363164 141 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNU6-407P-201ENST00000365280 104 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNU6-440P-201ENST00000390882 105 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AC018865.2-201ENST00000423631 129 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AC245047.3-201ENST00000429428 127 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.26□□□□□ -2.21
LCMT2O60294 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.26□□□□□ -2.21
LCMT2O60294 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNA5SP20-201ENST00000515976 84 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNU7-172P-201ENST00000517125 64 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.26□□□□□ -2.21
LCMT2O60294 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.26□□□□□ -2.21
LCMT2O60294 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 MIR4795-201ENST00000584182 89 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AC005828.6-201ENST00000606610 232 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 AC004467.1-201ENST00000615678 330 ntBASIC1.26□□□□□ -2.21
LCMT2O60294 RNY3P4-201ENST00000384428 101 ntBASIC1.25□□□□□ -2.21
LCMT2O60294 RNU6-1031P-201ENST00000384773 107 ntBASIC1.25□□□□□ -2.21
LCMT2O60294 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
LCMT2O60294 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms