Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RPL26P26-201ENST00000480251 434 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RPL36AP21-201ENST00000490372 323 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU7-99P-201ENST00000516271 62 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU1-142P-201ENST00000516682 145 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU1-92P-201ENST00000517017 135 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU6-699P-201ENST00000517081 110 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 SNORD116.3-201ENST00000517176 78 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU7-128P-201ENST00000517247 62 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAF3IP2O43734 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 VN1R91P-201ENST00000594377 169 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 AC005828.6-201ENST00000606610 232 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 MIR8074-201ENST00000615081 81 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 MIR3674-201ENST00000636576 68 ntBASIC1.18□□□□□ -2.22
TRAF3IP2O43734 RNU4-79P-201ENST00000362764 141 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RNU6-414P-201ENST00000363705 104 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.314-201ENST00000365114 102 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.428-201ENST00000384078 102 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.498-201ENST00000384460 102 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RNU6-950P-201ENST00000384651 107 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 MIR628-201ENST00000385229 95 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 SNORD78.2-201ENST00000391076 69 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RNA5SP467-201ENST00000391274 118 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RNU2-7P-201ENST00000410794 178 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 HSPE1P24-201ENST00000450782 238 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 RAB11AP2-201ENST00000545905 639 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAF3IP2O43734 AL161722.3-201ENST00000605789 2983 ntBASIC1.17□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.27-201ENST00000362540 103 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.361-201ENST00000365515 120 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.431-201ENST00000384086 102 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TRAF3IP2O43734 Y_RNA.605-201ENST00000410577 105 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 MTCO3P19-201ENST00000415864 321 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 snoU13.27-201ENST00000459278 104 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 RNU7-94P-201ENST00000459576 63 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 RNU6-1012P-201ENST00000516606 109 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 AP002001.1-203ENST00000534002 267 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 MIR4795-201ENST00000584182 89 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 MIR4438-201ENST00000585271 93 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 MIR4272-201ENST00000635924 64 ntBASIC1.16□□□□□ -2.22
TRAF3IP2O43734 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAF3IP2O43734 RNU6-439P-201ENST00000384188 106 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 SNORA20B-201ENST00000384220 132 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AL355796.1-201ENST00000406706 323 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 MIR1276-201ENST00000408707 83 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 RNA5SP475-201ENST00000410568 110 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AC010154.1-201ENST00000425857 269 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAF3IP2O43734 RPS27P1-201ENST00000450552 247 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AC097462.1-201ENST00000514125 324 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAF3IP2O43734 AL133255.1-201ENST00000606374 441 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 MIR7111-201ENST00000619751 72 ntBASIC1.15□□□□□ -2.23
TRAF3IP2O43734 MIR424-201ENST00000362227 98 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 SNORA27.1-201ENST00000362604 124 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.112-201ENST00000363250 102 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RNU6-454P-201ENST00000364292 107 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.243-201ENST00000364481 109 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.508-201ENST00000384502 114 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 MIR873-201ENST00000401120 77 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 MIR1267-201ENST00000408723 78 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 AL161935.2-201ENST00000414627 60 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RPL30P13-201ENST00000418873 348 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 AC018865.2-201ENST00000423631 129 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAF3IP2O43734 AC073910.1-201ENST00000445047 438 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RPS29P23-201ENST00000458635 123 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RNU7-169P-201ENST00000459456 61 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 RNU6-475P-201ENST00000516073 104 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 SNORA40.14-201ENST00000516543 86 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 U6.115-201ENST00000636045 103 ntBASIC1.14□□□□□ -2.23
TRAF3IP2O43734 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
TRAF3IP2O43734 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.5-201ENST00000362334 102 ntBASIC1.13□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.39-201ENST00000362620 98 ntBASIC1.13□□□□□ -2.23
TRAF3IP2O43734 Y_RNA.58-201ENST00000362807 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms