Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 Y_RNA.296-201ENST00000364930 108 ntBASIC0.21□□□□□ -2.38
CRXO43186 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
CRXO43186 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
CRXO43186 RNU6-261P-201ENST00000459506 102 ntBASIC0.21□□□□□ -2.38
CRXO43186 RN7SKP164-201ENST00000516138 266 ntBASIC0.21□□□□□ -2.38
CRXO43186 RNU6-415P-201ENST00000516252 97 ntBASIC0.21□□□□□ -2.38
CRXO43186 SNORA74.3-201ENST00000517108 154 ntBASIC0.21□□□□□ -2.38
CRXO43186 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.21□□□□□ -2.38
CRXO43186 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.21□□□□□ -2.38
CRXO43186 MTATP6P24-201ENST00000576835 677 ntBASIC0.21□□□□□ -2.38
CRXO43186 AC073648.5-201ENST00000603502 305 ntBASIC0.21□□□□□ -2.38
CRXO43186 MIR6734-201ENST00000621166 68 ntBASIC0.21□□□□□ -2.38
CRXO43186 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
CRXO43186 MIR1-1-201ENST00000362147 71 ntBASIC0.2□□□□□ -2.38
CRXO43186 SNORD113.3-201ENST00000364630 78 ntBASIC0.2□□□□□ -2.38
CRXO43186 SNORA72.3-201ENST00000365074 132 ntBASIC0.2□□□□□ -2.38
CRXO43186 SNORA69-201ENST00000383895 132 ntBASIC0.2□□□□□ -2.38
CRXO43186 CALM2P3-201ENST00000400429 449 ntBASIC0.2□□□□□ -2.38
CRXO43186 AL137792.2-201ENST00000443484 235 ntBASIC0.2□□□□□ -2.38
CRXO43186 MTND3P7-201ENST00000474435 343 ntBASIC0.2□□□□□ -2.38
CRXO43186 Y_RNA.683-201ENST00000516508 93 ntBASIC0.2□□□□□ -2.38
CRXO43186 AC073544.1-201ENST00000600110 1595 ntBASIC0.19□□□□□ -2.38
CRXO43186 RNU6-654P-201ENST00000364373 107 ntBASIC0.19□□□□□ -2.38
CRXO43186 SNORD14.1-201ENST00000365609 90 ntBASIC0.19□□□□□ -2.38
CRXO43186 RNU6-42P-201ENST00000384165 107 ntBASIC0.19□□□□□ -2.38
CRXO43186 MIR520G-201ENST00000385064 90 ntBASIC0.19□□□□□ -2.38
CRXO43186 MIR1827-201ENST00000408549 66 ntBASIC0.19□□□□□ -2.38
CRXO43186 RNU6-1304P-201ENST00000411374 106 ntBASIC0.19□□□□□ -2.38
CRXO43186 MTCO1P20-201ENST00000425366 358 ntBASIC0.19□□□□□ -2.38
CRXO43186 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.19□□□□□ -2.38
CRXO43186 SNORA18.7-201ENST00000516910 131 ntBASIC0.19□□□□□ -2.38
CRXO43186 AC134698.4-201ENST00000523451 826 ntBASIC0.19□□□□□ -2.38
CRXO43186 AL358944.1-201ENST00000528537 144 ntBASIC0.19□□□□□ -2.38
CRXO43186 MIR4764-201ENST00000580680 88 ntBASIC0.19□□□□□ -2.38
CRXO43186 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CRXO43186 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
CRXO43186 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CRXO43186 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CRXO43186 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
CRXO43186 RNU6-254P-201ENST00000363377 107 ntBASIC0.18□□□□□ -2.38
CRXO43186 Y_RNA.409-201ENST00000383990 98 ntBASIC0.18□□□□□ -2.38
CRXO43186 SNORA2B-201ENST00000384583 137 ntBASIC0.18□□□□□ -2.38
CRXO43186 MIR136-201ENST00000385207 82 ntBASIC0.18□□□□□ -2.38
CRXO43186 MIR518E-201ENST00000385252 88 ntBASIC0.18□□□□□ -2.38
CRXO43186 Y_RNA.621-201ENST00000411065 96 ntBASIC0.18□□□□□ -2.38
CRXO43186 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.18□□□□□ -2.38
CRXO43186 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.18□□□□□ -2.38
CRXO43186 PCNPP5-201ENST00000452246 481 ntBASIC0.18□□□□□ -2.38
CRXO43186 RNU7-175P-201ENST00000515915 61 ntBASIC0.18□□□□□ -2.38
CRXO43186 ACA59.1-201ENST00000515966 143 ntBASIC0.18□□□□□ -2.38
CRXO43186 RNU6-63P-201ENST00000516690 95 ntBASIC0.18□□□□□ -2.38
CRXO43186 AC093027.1-201ENST00000546698 429 ntBASIC0.18□□□□□ -2.38
CRXO43186 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.18□□□□□ -2.38
CRXO43186 AL589743.1-201ENST00000551932 2712 ntBASIC0.18□□□□□ -2.38
CRXO43186 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CRXO43186 AC121333.1-201ENST00000567488 2709 ntBASIC0.17□□□□□ -2.38
CRXO43186 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
CRXO43186 RNU6-1252P-201ENST00000363054 104 ntBASIC0.17□□□□□ -2.38
CRXO43186 RNU6-128P-201ENST00000383976 107 ntBASIC0.17□□□□□ -2.38
CRXO43186 RNU6-95P-201ENST00000384697 107 ntBASIC0.17□□□□□ -2.38
CRXO43186 MIR216A-201ENST00000385063 110 ntBASIC0.17□□□□□ -2.38
CRXO43186 RNU4-55P-201ENST00000410731 137 ntBASIC0.17□□□□□ -2.38
CRXO43186 RNU6-177P-201ENST00000411257 104 ntBASIC0.17□□□□□ -2.38
CRXO43186 AL390729.2-201ENST00000416137 156 ntBASIC0.17□□□□□ -2.38
CRXO43186 AC243428.1-201ENST00000421099 264 ntBASIC0.17□□□□□ -2.38
CRXO43186 AL590632.1-201ENST00000424289 371 ntBASIC0.17□□□□□ -2.38
CRXO43186 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.17□□□□□ -2.38
CRXO43186 MTND1P11-201ENST00000456661 876 ntBASIC0.17□□□□□ -2.38
CRXO43186 AC046134.1-201ENST00000514454 666 ntBASIC0.17□□□□□ -2.38
CRXO43186 MTND1P24-201ENST00000552175 861 ntBASIC0.17□□□□□ -2.38
CRXO43186 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.17□□□□□ -2.38
CRXO43186 AC019193.3-201ENST00000609144 554 ntBASIC0.17□□□□□ -2.38
CRXO43186 AC097520.1-201ENST00000624435 385 ntBASIC0.17□□□□□ -2.38
CRXO43186 Y_RNA.373-201ENST00000365600 103 ntBASIC0.16□□□□□ -2.38
CRXO43186 Y_RNA.405-201ENST00000383979 100 ntBASIC0.16□□□□□ -2.38
CRXO43186 Y_RNA.451-201ENST00000384200 100 ntBASIC0.16□□□□□ -2.38
CRXO43186 RNU6-281P-201ENST00000384212 103 ntBASIC0.16□□□□□ -2.38
CRXO43186 Y_RNA.524-201ENST00000384564 100 ntBASIC0.16□□□□□ -2.38
CRXO43186 Y_RNA.561-201ENST00000384694 100 ntBASIC0.16□□□□□ -2.38
CRXO43186 MIR517A-201ENST00000385001 87 ntBASIC0.16□□□□□ -2.38
CRXO43186 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
CRXO43186 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.16□□□□□ -2.38
CRXO43186 AC083798.1-201ENST00000472671 131 ntBASIC0.16□□□□□ -2.38
CRXO43186 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.16□□□□□ -2.38
CRXO43186 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.16□□□□□ -2.38
CRXO43186 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.16□□□□□ -2.38
CRXO43186 RNU11-2P-201ENST00000516898 142 ntBASIC0.16□□□□□ -2.38
CRXO43186 MIR3684-201ENST00000579779 74 ntBASIC0.16□□□□□ -2.38
CRXO43186 AC012433.1-201ENST00000588916 398 ntBASIC0.16□□□□□ -2.38
CRXO43186 AL162730.1-201ENST00000605734 292 ntBASIC0.16□□□□□ -2.38
CRXO43186 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.16□□□□□ -2.38
CRXO43186 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.16□□□□□ -2.38
CRXO43186 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.15□□□□□ -2.39
CRXO43186 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
CRXO43186 RNU6-117P-201ENST00000365415 107 ntBASIC0.15□□□□□ -2.39
CRXO43186 Y_RNA.372-201ENST00000365599 102 ntBASIC0.15□□□□□ -2.39
CRXO43186 RNU6-342P-201ENST00000384521 104 ntBASIC0.15□□□□□ -2.39
CRXO43186 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.15□□□□□ -2.39
CRXO43186 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
CRXO43186 AC074133.1-201ENST00000515696 183 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms