Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR5094-201ENST00000578766 85 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 AL512605.2-201ENST00000592972 256 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 AC078899.2-201ENST00000595282 212 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 AL359075.3-201ENST00000613288 217 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.31□□□□□ -2.04
PHGDHO43175 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PHGDHO43175 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.31□□□□□ -2.04
PHGDHO43175 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PHGDHO43175 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PHGDHO43175 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PHGDHO43175 AL356292.1-201ENST00000283110 373 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 Y_RNA.54-201ENST00000362766 105 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU1-22P-201ENST00000363334 158 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 SNORD27-201ENST00000363981 72 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 MT-TG-201ENST00000387429 68 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU6-651P-201ENST00000411040 105 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 HSPE1P13-201ENST00000451143 297 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 AC234781.5-201ENST00000508429 271 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU6-1278P-201ENST00000516130 107 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU6-191P-201ENST00000516295 94 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNVU1-2-201ENST00000516326 135 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU1-142P-201ENST00000516682 145 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU6-388P-201ENST00000517012 105 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 RNU6-389P-201ENST00000517048 105 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.3□□□□□ -2.04
PHGDHO43175 AC069114.2-201ENST00000604699 304 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 AL136360.1-201ENST00000503377 1900 ntBASIC2.3□□□□□ -2.04
PHGDHO43175 Y_RNA.539-201ENST00000384635 107 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 EBAG9P1-201ENST00000418955 543 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 MTND2P29-201ENST00000438595 412 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC091959.1-201ENST00000495857 238 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 RPS29P21-201ENST00000496272 170 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.29□□□□□ -2.04
PHGDHO43175 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC090425.1-201ENST00000610007 140 ntBASIC2.29□□□□□ -2.04
PHGDHO43175 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
PHGDHO43175 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PHGDHO43175 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 Y_RNA.172-201ENST00000363765 102 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 Y_RNA.416-201ENST00000384014 113 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 RNU6-662P-201ENST00000384253 104 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 Y_RNA.476-201ENST00000384347 108 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 Y_RNA.500-201ENST00000384466 111 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 SNORA8-201ENST00000384574 139 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 RNU6-376P-201ENST00000384731 106 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 SNORA48.1-201ENST00000390879 135 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.28□□□□□ -2.04
PHGDHO43175 RNU7-99P-201ENST00000516271 62 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 RNU6-63P-201ENST00000516690 95 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 AC024995.1-201ENST00000523014 93 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 AC073413.2-201ENST00000604332 360 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 U1.36-201ENST00000620684 176 ntBASIC2.28□□□□□ -2.04
PHGDHO43175 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.28□□□□□ -2.04
PHGDHO43175 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PHGDHO43175 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PHGDHO43175 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 Y_RNA.117-201ENST00000363294 101 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 RNU6-740P-201ENST00000364734 105 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 Y_RNA.341-201ENST00000365341 102 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.27□□□□□ -2.05
PHGDHO43175 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
PHGDHO43175 AL135790.2-201ENST00000437701 267 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 RNU6-111P-201ENST00000517179 105 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.27□□□□□ -2.05
PHGDHO43175 AC005357.1-201ENST00000588399 301 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.27□□□□□ -2.05
PHGDHO43175 AC078938.1-201ENST00000620993 318 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 MIR6852-201ENST00000621699 66 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
PHGDHO43175 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHGDHO43175 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PHGDHO43175 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PHGDHO43175 RNU6-1019P-201ENST00000364424 107 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 SNORA20.1-201ENST00000364790 130 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 RNU6-117P-201ENST00000365415 107 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 Y_RNA.352-201ENST00000365439 102 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 Y_RNA.368-201ENST00000365547 113 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 RNU6-338P-201ENST00000383888 105 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 Y_RNA.456-201ENST00000384232 111 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 SNORD116-13-201ENST00000384408 92 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 OOSP1P1-201ENST00000423265 274 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 RNU6-1023P-201ENST00000516137 106 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 SNORA27.4-201ENST00000516650 95 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 RNU7-128P-201ENST00000517247 62 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 U2.14-201ENST00000615943 113 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.26□□□□□ -2.05
PHGDHO43175 U6.108-201ENST00000637764 58 ntBASIC2.26□□□□□ -2.05
PHGDHO43175 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.26□□□□□ -2.05
PHGDHO43175 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PHGDHO43175 Y_RNA.44-201ENST00000362676 108 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms