Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHOXO15266 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHOXO15266 SNORA63.1-201ENST00000362493 131 ntBASIC2.85□□□□□ -1.95
SHOXO15266 Y_RNA.796-201ENST00000364268 102 ntBASIC2.85□□□□□ -1.95
SHOXO15266 Y_RNA.242-201ENST00000364473 110 ntBASIC2.85□□□□□ -1.95
SHOXO15266 Y_RNA.799-201ENST00000364992 102 ntBASIC2.85□□□□□ -1.95
SHOXO15266 SNORD50B-201ENST00000364995 70 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RNU6-484P-201ENST00000384016 107 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RNU6-1168P-201ENST00000390831 104 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RNA5SP323-201ENST00000391094 133 ntBASIC2.85□□□□□ -1.95
SHOXO15266 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.85□□□□□ -1.95
SHOXO15266 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
SHOXO15266 PRSS3P4-201ENST00000453323 162 ntBASIC2.85□□□□□ -1.95
SHOXO15266 SNORD11-201ENST00000459124 84 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RPL23AP67-201ENST00000465341 474 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RNU6-1041P-201ENST00000516254 102 ntBASIC2.85□□□□□ -1.95
SHOXO15266 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.85□□□□□ -1.95
SHOXO15266 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.85□□□□□ -1.95
SHOXO15266 AC091953.5-201ENST00000622919 233 ntBASIC2.85□□□□□ -1.95
SHOXO15266 MIR338-201ENST00000636369 67 ntBASIC2.85□□□□□ -1.95
SHOXO15266 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHOXO15266 ZNF702P-202ENST00000434269 1966 ntBASIC2.85□□□□□ -1.95
SHOXO15266 AL161912.2-201ENST00000565707 3007 ntBASIC2.85□□□□□ -1.95
SHOXO15266 RNU6-1209P-201ENST00000363655 107 ntBASIC2.84□□□□□ -1.95
SHOXO15266 RN7SKP284-201ENST00000411002 343 ntBASIC2.84□□□□□ -1.95
SHOXO15266 AL035423.1-201ENST00000420331 213 ntBASIC2.84□□□□□ -1.95
SHOXO15266 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.84□□□□□ -1.95
SHOXO15266 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.84□□□□□ -1.95
SHOXO15266 RNU7-94P-201ENST00000459576 63 ntBASIC2.84□□□□□ -1.95
SHOXO15266 OR9P1P-201ENST00000496431 281 ntBASIC2.84□□□□□ -1.95
SHOXO15266 RN7SKP18-201ENST00000516005 275 ntBASIC2.84□□□□□ -1.95
SHOXO15266 AP001328.1-201ENST00000528550 176 ntBASIC2.84□□□□□ -1.95
SHOXO15266 AC026271.5-201ENST00000577873 130 ntBASIC2.84□□□□□ -1.95
SHOXO15266 AC012314.7-201ENST00000619693 93 ntBASIC2.84□□□□□ -1.95
SHOXO15266 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHOXO15266 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.83□□□□□ -1.96
SHOXO15266 SNORD9-201ENST00000362566 104 ntBASIC2.83□□□□□ -1.96
SHOXO15266 RNU1-70P-201ENST00000362618 164 ntBASIC2.83□□□□□ -1.96
SHOXO15266 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
SHOXO15266 RNA5SP51-201ENST00000364750 119 ntBASIC2.83□□□□□ -1.96
SHOXO15266 RNU6-1180P-201ENST00000364935 107 ntBASIC2.83□□□□□ -1.96
SHOXO15266 SNORA20-201ENST00000384662 132 ntBASIC2.83□□□□□ -1.96
SHOXO15266 RNU6-588P-201ENST00000410281 105 ntBASIC2.83□□□□□ -1.96
SHOXO15266 ATP5A1P2-201ENST00000412323 255 ntBASIC2.83□□□□□ -1.96
SHOXO15266 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOXO15266 Z96811.1-201ENST00000445880 108 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AL133547.1-201ENST00000448546 220 ntBASIC2.83□□□□□ -1.96
SHOXO15266 SNORD105B-201ENST00000458770 79 ntBASIC2.83□□□□□ -1.96
SHOXO15266 RNU7-197P-201ENST00000458836 62 ntBASIC2.83□□□□□ -1.96
SHOXO15266 Y_RNA.714-201ENST00000517065 90 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AC024995.1-201ENST00000523014 93 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AL358944.1-201ENST00000528537 144 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AC120024.3-201ENST00000603167 156 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AL161756.2-201ENST00000604597 246 ntBASIC2.83□□□□□ -1.96
SHOXO15266 MIR7851-201ENST00000610611 160 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AC011603.4-201ENST00000611325 277 ntBASIC2.83□□□□□ -1.96
SHOXO15266 U4.6-201ENST00000621618 127 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AP001340.1-201ENST00000624405 217 ntBASIC2.83□□□□□ -1.96
SHOXO15266 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SHOXO15266 AP006437.1-201ENST00000641440 3685 ntBASIC2.83□□□□□ -1.96
SHOXO15266 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
SHOXO15266 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOXO15266 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.82□□□□□ -1.96
SHOXO15266 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOXO15266 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
SHOXO15266 U8.11-201ENST00000384699 133 ntBASIC2.82□□□□□ -1.96
SHOXO15266 MIR491-201ENST00000384877 84 ntBASIC2.82□□□□□ -1.96
SHOXO15266 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC233266.1-201ENST00000454518 96 ntBASIC2.82□□□□□ -1.96
SHOXO15266 U8.18-201ENST00000459285 133 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC092991.1-201ENST00000477176 376 ntBASIC2.82□□□□□ -1.96
SHOXO15266 RNU6-971P-201ENST00000516920 106 ntBASIC2.82□□□□□ -1.96
SHOXO15266 RNU6-341P-201ENST00000516973 96 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC097639.2-201ENST00000603159 172 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC242852.1-201ENST00000612151 96 ntBASIC2.82□□□□□ -1.96
SHOXO15266 AC244015.1-201ENST00000622301 99 ntBASIC2.82□□□□□ -1.96
SHOXO15266 MIR6079-201ENST00000635807 62 ntBASIC2.82□□□□□ -1.96
SHOXO15266 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOXO15266 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
SHOXO15266 RNU6-978P-201ENST00000364371 103 ntBASIC2.81□□□□□ -1.96
SHOXO15266 RNA5SP72-201ENST00000364442 117 ntBASIC2.81□□□□□ -1.96
SHOXO15266 RNU6-1138P-201ENST00000365359 106 ntBASIC2.81□□□□□ -1.96
SHOXO15266 RNU6-1072P-201ENST00000384703 107 ntBASIC2.81□□□□□ -1.96
SHOXO15266 RNU6-443P-201ENST00000384780 107 ntBASIC2.81□□□□□ -1.96
SHOXO15266 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
SHOXO15266 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
SHOXO15266 CST2P1-201ENST00000425770 87 ntBASIC2.81□□□□□ -1.96
SHOXO15266 AC104389.3-201ENST00000445629 235 ntBASIC2.81□□□□□ -1.96
SHOXO15266 RNU6-1211P-201ENST00000459179 105 ntBASIC2.81□□□□□ -1.96
SHOXO15266 HMGN1P7-201ENST00000491722 313 ntBASIC2.81□□□□□ -1.96
SHOXO15266 YWHAEP4-201ENST00000505390 198 ntBASIC2.81□□□□□ -1.96
SHOXO15266 FCF1P8-201ENST00000510322 597 ntBASIC2.81□□□□□ -1.96
SHOXO15266 SNORA70.18-201ENST00000516696 98 ntBASIC2.81□□□□□ -1.96
SHOXO15266 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOXO15266 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOXO15266 U7.2-201ENST00000607576 63 ntBASIC2.81□□□□□ -1.96
SHOXO15266 AL365222.1-201ENST00000614661 98 ntBASIC2.81□□□□□ -1.96
SHOXO15266 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.81□□□□□ -1.96
SHOXO15266 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms