Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.47□□□□□ -2.33
DFFAO00273 FO082796.1-201ENST00000523795 183 ntBASIC0.47□□□□□ -2.33
DFFAO00273 AC131055.1-201ENST00000584626 316 ntBASIC0.47□□□□□ -2.33
DFFAO00273 AC242852.1-201ENST00000612151 96 ntBASIC0.47□□□□□ -2.33
DFFAO00273 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
DFFAO00273 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.47□□□□□ -2.33
DFFAO00273 Y_RNA.77-201ENST00000362962 107 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNU4-41P-201ENST00000364426 143 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNU6-1264P-201ENST00000383891 107 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNU6-281P-201ENST00000384212 103 ntBASIC0.46□□□□□ -2.34
DFFAO00273 MIR520G-201ENST00000385064 90 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNU1-139P-201ENST00000391307 165 ntBASIC0.46□□□□□ -2.34
DFFAO00273 MTCO3P40-201ENST00000392516 676 ntBASIC0.46□□□□□ -2.34
DFFAO00273 DEFB108C-201ENST00000400154 252 ntBASIC0.46□□□□□ -2.34
DFFAO00273 SNORD99-201ENST00000408612 74 ntBASIC0.46□□□□□ -2.34
DFFAO00273 Y_RNA.615-201ENST00000410769 117 ntBASIC0.46□□□□□ -2.34
DFFAO00273 ZNF885P-201ENST00000420174 1098 ntBASIC0.46□□□□□ -2.34
DFFAO00273 MTND3P23-201ENST00000431980 347 ntBASIC0.46□□□□□ -2.34
DFFAO00273 Z98949.2-201ENST00000440996 144 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AL137792.2-201ENST00000443484 235 ntBASIC0.46□□□□□ -2.34
DFFAO00273 U7.7-201ENST00000459276 60 ntBASIC0.46□□□□□ -2.34
DFFAO00273 CYCTP-201ENST00000504253 315 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNA5SP436-201ENST00000516020 115 ntBASIC0.46□□□□□ -2.34
DFFAO00273 RNU6-1114P-201ENST00000516022 107 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AL358944.1-201ENST00000528537 144 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AC025627.3-201ENST00000582078 182 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AC092954.2-201ENST00000609103 430 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AC007014.2-201ENST00000615581 479 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AC022709.1-201ENST00000615967 87 ntBASIC0.46□□□□□ -2.34
DFFAO00273 SEPT14P17-201ENST00000617978 177 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AL359880.1-201ENST00000621879 266 ntBASIC0.46□□□□□ -2.34
DFFAO00273 AL008636.1-201ENST00000625038 1018 ntBASIC0.46□□□□□ -2.34
DFFAO00273 MTND5P26-201ENST00000426018 1752 ntBASIC0.46□□□□□ -2.34
DFFAO00273 MIR103A2-201ENST00000362154 78 ntBASIC0.45□□□□□ -2.34
DFFAO00273 Y_RNA.405-201ENST00000383979 100 ntBASIC0.45□□□□□ -2.34
DFFAO00273 Y_RNA.451-201ENST00000384200 100 ntBASIC0.45□□□□□ -2.34
DFFAO00273 SNORD116-8-201ENST00000384365 95 ntBASIC0.45□□□□□ -2.34
DFFAO00273 Y_RNA.524-201ENST00000384564 100 ntBASIC0.45□□□□□ -2.34
DFFAO00273 Y_RNA.561-201ENST00000384694 100 ntBASIC0.45□□□□□ -2.34
DFFAO00273 MIR518E-201ENST00000385252 88 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AL162725.1-201ENST00000435405 301 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
DFFAO00273 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.45□□□□□ -2.34
DFFAO00273 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.45□□□□□ -2.34
DFFAO00273 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.45□□□□□ -2.34
DFFAO00273 RNU6-256P-201ENST00000516747 97 ntBASIC0.45□□□□□ -2.34
DFFAO00273 MTND4LP26-201ENST00000518144 282 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AP003716.2-201ENST00000528260 108 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC109810.1-201ENST00000534066 224 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC093023.1-201ENST00000547375 507 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AL512360.1-201ENST00000555346 234 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC023827.1-201ENST00000569247 97 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC120024.3-201ENST00000603167 156 ntBASIC0.45□□□□□ -2.34
DFFAO00273 AC027279.3-201ENST00000625055 122 ntBASIC0.45□□□□□ -2.34
DFFAO00273 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
DFFAO00273 Y_RNA.122-201ENST00000363331 96 ntBASIC0.44□□□□□ -2.34
DFFAO00273 RNU6-117P-201ENST00000365415 107 ntBASIC0.44□□□□□ -2.34
DFFAO00273 RNU6-1119P-201ENST00000384349 108 ntBASIC0.44□□□□□ -2.34
DFFAO00273 RNU6-163P-201ENST00000384396 106 ntBASIC0.44□□□□□ -2.34
DFFAO00273 Y_RNA.530-201ENST00000384587 101 ntBASIC0.44□□□□□ -2.34
DFFAO00273 Y_RNA.533-201ENST00000384596 114 ntBASIC0.44□□□□□ -2.34
DFFAO00273 SNORD89-201ENST00000390981 114 ntBASIC0.44□□□□□ -2.34
DFFAO00273 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.44□□□□□ -2.34
DFFAO00273 USMG5P1-201ENST00000425964 177 ntBASIC0.44□□□□□ -2.34
DFFAO00273 USP9YP16-201ENST00000430287 407 ntBASIC0.44□□□□□ -2.34
DFFAO00273 RPL23AP50-201ENST00000434149 455 ntBASIC0.44□□□□□ -2.34
DFFAO00273 USP9YP23-201ENST00000455085 407 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.44□□□□□ -2.34
DFFAO00273 DISC2.1-201ENST00000612827 205 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AC093913.1-201ENST00000614178 329 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AC244015.1-201ENST00000622301 99 ntBASIC0.44□□□□□ -2.34
DFFAO00273 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AC073544.1-201ENST00000600110 1595 ntBASIC0.44□□□□□ -2.34
DFFAO00273 AL442644.1-201ENST00000454390 3105 ntBASIC0.43□□□□□ -2.34
DFFAO00273 RNU6-222P-201ENST00000362438 107 ntBASIC0.43□□□□□ -2.34
DFFAO00273 Y_RNA.212-201ENST00000364177 102 ntBASIC0.43□□□□□ -2.34
DFFAO00273 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
DFFAO00273 MIR1185-1-201ENST00000408598 86 ntBASIC0.43□□□□□ -2.34
DFFAO00273 RNU6-1001P-201ENST00000411265 100 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.43□□□□□ -2.34
DFFAO00273 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.43□□□□□ -2.34
DFFAO00273 RNU6-1096P-201ENST00000517089 102 ntBASIC0.43□□□□□ -2.34
DFFAO00273 OSBPL9P5-201ENST00000542581 171 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AC018659.1-201ENST00000551083 169 ntBASIC0.43□□□□□ -2.34
DFFAO00273 MIR3672-201ENST00000584290 82 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AL162413.1-201ENST00000603198 110 ntBASIC0.43□□□□□ -2.34
DFFAO00273 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AC078883.4-201ENST00000623218 367 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AC127459.3-201ENST00000624328 466 ntBASIC0.43□□□□□ -2.34
DFFAO00273 AC124864.2-201ENST00000624736 186 ntBASIC0.43□□□□□ -2.34
DFFAO00273 ZNF299P-201ENST00000406845 1804 ntBASIC0.43□□□□□ -2.34
DFFAO00273 RNU6-595P-201ENST00000363944 107 ntBASIC0.42□□□□□ -2.34
DFFAO00273 RNU6-596P-201ENST00000365395 98 ntBASIC0.42□□□□□ -2.34
DFFAO00273 Y_RNA.354-201ENST00000365448 111 ntBASIC0.42□□□□□ -2.34
DFFAO00273 RNU6-1042P-201ENST00000384204 107 ntBASIC0.42□□□□□ -2.34
DFFAO00273 Y_RNA.490-201ENST00000384413 102 ntBASIC0.42□□□□□ -2.34
DFFAO00273 MIR452-201ENST00000385020 85 ntBASIC0.42□□□□□ -2.34
DFFAO00273 ELOCP21-201ENST00000412558 336 ntBASIC0.42□□□□□ -2.34
DFFAO00273 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms