Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNU6-908P-201ENST00000410160 94 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 USMG5P1-201ENST00000425964 177 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.85□□□□□ -2.27
CLRN2A0PK11 AC104332.1-201ENST00000440471 797 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 AC091021.1-201ENST00000468051 388 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 RNU6-917P-201ENST00000516294 104 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 RNU6-314P-201ENST00000516574 104 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 MIR924-201ENST00000638017 53 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 AC068137.4-201ENST00000638485 296 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CLRN2A0PK11 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CLRN2A0PK11 AC005592.1-201ENST00000566527 1640 ntBASIC0.85□□□□□ -2.27
CLRN2A0PK11 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CLRN2A0PK11 Y_RNA.256-201ENST00000364594 104 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 SNORD116-11-201ENST00000383882 92 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 RNU6-424P-201ENST00000384367 105 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 USP9YP16-201ENST00000430287 407 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 USP9YP23-201ENST00000455085 407 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 AC018710.1-201ENST00000506509 158 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 AC097462.1-201ENST00000514125 324 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 Y_RNA.706-201ENST00000516933 99 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 AC006435.5-201ENST00000624486 112 ntBASIC0.84□□□□□ -2.27
CLRN2A0PK11 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
CLRN2A0PK11 RNU6-222P-201ENST00000362438 107 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 Y_RNA.48-201ENST00000362710 103 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 SNORA20B-201ENST00000384220 132 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 SNORD116-1-201ENST00000384335 95 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 MTCO3P19-201ENST00000415864 321 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.83□□□□□ -2.28
CLRN2A0PK11 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.83□□□□□ -2.28
CLRN2A0PK11 MTND1P1-201ENST00000445453 368 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AC233266.1-201ENST00000454518 96 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 RNU7-66P-201ENST00000459469 62 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AC136628.3-201ENST00000521868 290 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AC093023.1-201ENST00000547375 507 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 MIR5696-201ENST00000578474 85 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AC242852.1-201ENST00000612151 96 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 AC244015.1-201ENST00000622301 99 ntBASIC0.83□□□□□ -2.28
CLRN2A0PK11 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CLRN2A0PK11 RNU6-451P-201ENST00000362921 107 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 RNY3P3-201ENST00000363816 102 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 AC243428.1-201ENST00000421099 264 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 MTND3P23-201ENST00000431980 347 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 UQCRBP2-201ENST00000447827 297 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
CLRN2A0PK11 RNU6-1291P-201ENST00000516591 104 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.82□□□□□ -2.28
CLRN2A0PK11 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.82□□□□□ -2.28
CLRN2A0PK11 MIR3942-201ENST00000585264 109 ntBASIC0.82□□□□□ -2.28
CLRN2A0PK11 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.82□□□□□ -2.28
CLRN2A0PK11 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLRN2A0PK11 ZNF299P-201ENST00000406845 1804 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 RNU6-1090P-201ENST00000364065 94 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLRN2A0PK11 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CLRN2A0PK11 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.81□□□□□ -2.28
CLRN2A0PK11 AC022493.2-201ENST00000506122 481 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 RNA5SP20-201ENST00000515976 84 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 RNU7-28P-201ENST00000516759 62 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 AP002001.1-203ENST00000534002 267 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 AL512605.2-201ENST00000592972 256 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 MIR1321-201ENST00000637766 79 ntBASIC0.81□□□□□ -2.28
CLRN2A0PK11 SNORA1B-201ENST00000362535 133 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 Y_RNA.106-201ENST00000363189 100 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 Y_RNA.135-201ENST00000363439 95 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU6-1059P-201ENST00000363752 98 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU6-969P-201ENST00000383900 105 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU6-281P-201ENST00000384212 103 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU6-136P-201ENST00000384663 107 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU2-16P-201ENST00000410712 136 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC018865.2-201ENST00000423631 129 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC098826.2-201ENST00000452011 651 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.8□□□□□ -2.28
CLRN2A0PK11 LINC01399-202ENST00000458450 244 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU7-87P-201ENST00000459343 62 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 OR9P1P-201ENST00000496431 281 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU6-1114P-201ENST00000516022 107 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNA5SP330-201ENST00000517096 96 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 RNU1-54P-201ENST00000517181 120 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC245505.1-201ENST00000556398 224 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC100812.1-201ENST00000607622 580 ntBASIC0.8□□□□□ -2.28
CLRN2A0PK11 AC073544.1-201ENST00000600110 1595 ntBASIC0.79□□□□□ -2.28
CLRN2A0PK11 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
CLRN2A0PK11 Y_RNA.559-201ENST00000384686 107 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms