Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC009161.2-201ENST00000624626 138 ntBASIC-0.29□□□□□ -2.46
TRAV4A0A0B4J268 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 SNORD115-32-201ENST00000364079 82 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-325P-201ENST00000411132 105 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 MTND1P26-201ENST00000440488 538 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-107P-201ENST00000516643 102 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 MTND4P7-201ENST00000523876 130 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 CPDP1-201ENST00000579660 283 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 MIR4305-201ENST00000583252 102 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 AL022161.1-201ENST00000604390 213 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 AC090517.2-201ENST00000614966 680 ntBASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.3□□□□□ -2.46
TRAV4A0A0B4J268 SNORA27.1-201ENST00000362604 124 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 RNU4-9P-201ENST00000364951 139 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-514P-201ENST00000384208 107 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-933P-201ENST00000384424 107 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-541P-201ENST00000384709 110 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 MIR153-2-201ENST00000385225 87 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AL137792.2-201ENST00000443484 235 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC018710.1-201ENST00000506509 158 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AP001506.1-201ENST00000615444 211 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC006504.8-201ENST00000621046 635 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 AC127459.3-201ENST00000624328 466 ntBASIC-0.31□□□□□ -2.46
TRAV4A0A0B4J268 U8.5-201ENST00000364528 136 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-580P-201ENST00000365159 107 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AL590002.1-201ENST00000406554 418 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 SNORD100-201ENST00000408573 76 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AL356010.1-201ENST00000456364 102 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 RNU7-56P-201ENST00000458744 62 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AC093303.1-201ENST00000514549 295 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AP003461.1-201ENST00000528866 78 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AL157687.1-201ENST00000554853 619 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AL355375.2-201ENST00000574825 175 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 MIR4762-201ENST00000585261 75 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AC016597.2-201ENST00000613256 341 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AC107308.1-201ENST00000615897 301 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 MIR2909-201ENST00000617113 69 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 AL158209.2-201ENST00000619266 216 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 MIR1295B-201ENST00000636144 60 ntBASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
TRAV4A0A0B4J268 U8.7-201ENST00000364940 136 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-302P-201ENST00000365249 107 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 RNU2-9P-201ENST00000410194 145 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 AL359672.1-201ENST00000442302 409 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 AL033528.1-201ENST00000453780 140 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 RNU7-180P-201ENST00000459240 63 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MTCO1P29-201ENST00000496868 288 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 RNA5SP268-201ENST00000516828 124 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MTND1P8-201ENST00000571424 950 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MIR4771-2-201ENST00000577758 74 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MIR4771-1-201ENST00000582617 74 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MIR548AB-201ENST00000584917 84 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 HULC.1-201ENST00000612720 240 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 AC022306.3-201ENST00000619930 550 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 AC067863.3-201ENST00000624172 122 ntBASIC-0.33□□□□□ -2.46
TRAV4A0A0B4J268 MIR377-201ENST00000362145 69 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-282P-201ENST00000365357 103 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-159P-201ENST00000391080 106 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 RNA5SP127-201ENST00000411051 133 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 AC133104.1-201ENST00000429100 218 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 snoU13.21-201ENST00000459368 105 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 MIR4676-201ENST00000583078 72 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 AF250324.2-201ENST00000608299 610 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 AC010608.3-201ENST00000625048 527 ntBASIC-0.34□□□□□ -2.46
TRAV4A0A0B4J268 RNU6-181P-201ENST00000363225 107 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 MIR513B-201ENST00000385136 84 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 MT-TN-201ENST00000387400 73 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 AL390729.2-201ENST00000416137 156 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 MTND4P32-201ENST00000437189 1237 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 AL009048.1-201ENST00000450437 298 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 MTCO3P38-201ENST00000468910 766 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 HMGN1P10-201ENST00000474557 553 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-189P-201ENST00000516120 101 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 RNA5SP480-201ENST00000516840 109 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 RNU6-445P-201ENST00000516949 107 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 PIGPP4-201ENST00000584447 307 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 AC008536.2-201ENST00000607284 349 ntBASIC-0.35□□□□□ -2.47
TRAV4A0A0B4J268 AL136370.1-201ENST00000608166 691 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms