Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC022306.3-201ENST00000619930 550 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 AC092634.7-201ENST00000621022 103 ntBASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORA27.1-201ENST00000362604 124 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-280P-201ENST00000364145 104 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-117P-201ENST00000365415 107 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-996P-201ENST00000365438 107 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNY3P9-201ENST00000384727 106 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-613P-201ENST00000410412 108 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 SNORD83.1-201ENST00000411362 77 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 Z82188.1-201ENST00000436709 154 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 TPTE2P5-203ENST00000458118 728 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC114811.1-201ENST00000507207 168 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP20-201ENST00000515976 84 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU6-863P-201ENST00000515989 104 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNU7-43P-201ENST00000516554 64 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AC022523.2-201ENST00000561045 150 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR4762-201ENST00000585261 75 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 AL133215.3-201ENST00000609801 448 ntBASIC-0.02□□□□□ -2.41
TRAV1-1A0A0B4J248 RNA5SP257-201ENST00000363023 116 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 U8.5-201ENST00000364528 136 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR520G-201ENST00000385064 90 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR153-2-201ENST00000385225 87 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MTCO1P20-201ENST00000425366 358 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MTND1P4-201ENST00000435196 415 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MTCO2P16-201ENST00000436962 677 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 AL137792.2-201ENST00000443484 235 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 RBM11P1-201ENST00000604951 799 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 MIR6718-201ENST00000616153 80 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 AC009248.2-201ENST00000619826 254 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 AC006504.8-201ENST00000621046 635 ntBASIC-0.03□□□□□ -2.41
TRAV1-1A0A0B4J248 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU4-21P-201ENST00000362802 126 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RNA5SP517-201ENST00000364724 117 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD14.1-201ENST00000365609 90 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-376P-201ENST00000384731 106 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR520F-201ENST00000384824 87 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR136-201ENST00000385207 82 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC018865.2-201ENST00000423631 129 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 PIGPP3-201ENST00000425307 415 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC015818.7-201ENST00000428754 109 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC087499.7-201ENST00000441958 109 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 ELOCP24-201ENST00000456370 334 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 snoU13.21-201ENST00000459368 105 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RPS3AP17-201ENST00000472594 777 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 TRBVB-201ENST00000477100 408 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC091885.1-201ENST00000506658 268 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC069113.3-201ENST00000521019 150 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 AC008536.2-201ENST00000607284 349 ntBASIC-0.04□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-580P-201ENST00000365159 107 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA2B-201ENST00000384583 137 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 MTCYBP4-201ENST00000401524 249 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL590002.1-201ENST00000406554 418 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL606923.1-201ENST00000406616 190 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA40.8-201ENST00000411034 126 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU7-63P-201ENST00000459054 62 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 RPL23AP91-201ENST00000569211 455 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR3612-201ENST00000579753 87 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORA25.18-201ENST00000607153 114 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 AL357078.3-201ENST00000607528 618 ntBASIC-0.05□□□□□ -2.42
TRAV1-1A0A0B4J248 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD113-7-201ENST00000363762 77 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-214P-201ENST00000384130 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR15B-201ENST00000385045 98 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR520H-201ENST00000385126 88 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 MIR516B2-201ENST00000385190 85 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 RNU6-679P-201ENST00000391003 106 ntBASIC-0.06□□□□□ -2.42
TRAV1-1A0A0B4J248 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms