Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 RNA5SP517-201ENST00000364724 117 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 RNU4-9P-201ENST00000364951 139 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 SNORD14.1-201ENST00000365609 90 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 RNU6-159P-201ENST00000391080 106 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 AL359672.1-201ENST00000442302 409 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 AL137792.2-201ENST00000443484 235 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 AC073415.1-201ENST00000449240 153 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 MTCO1P29-201ENST00000496868 288 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 RNU6-189P-201ENST00000516120 101 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 AC091144.1-201ENST00000519573 138 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 MIR3612-201ENST00000579753 87 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 MIR4300-201ENST00000581016 96 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 MIR2909-201ENST00000617113 69 ntBASIC-0.08□□□□□ -2.42
TRAV3A0A0B4J244 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 SNORA27.1-201ENST00000362604 124 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 RNU6-280P-201ENST00000364145 104 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 RNU6-815P-201ENST00000384080 113 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MIR329-2-201ENST00000385029 84 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MIR136-201ENST00000385207 82 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MIR620-201ENST00000385232 95 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MTCO1P20-201ENST00000425366 358 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MTCO2P11-201ENST00000431069 680 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MRPS10P2-201ENST00000431226 381 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 AC114811.1-201ENST00000507207 168 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 RNA5SP285-201ENST00000516619 119 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MTND2P38-201ENST00000522536 667 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 AC104576.1-201ENST00000524225 88 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 AC023442.1-201ENST00000531247 422 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 AL133215.3-201ENST00000609801 448 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 AC016597.2-201ENST00000613256 341 ntBASIC-0.09□□□□□ -2.42
TRAV3A0A0B4J244 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 MIR520F-201ENST00000384824 87 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 MIR153-2-201ENST00000385225 87 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 RNU2-9P-201ENST00000410194 145 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 MTATP6P18-201ENST00000417994 673 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 AC243428.1-201ENST00000421099 264 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 AC018865.2-201ENST00000423631 129 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 SNORD11.1-201ENST00000459482 85 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 RPS3AP17-201ENST00000472594 777 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 AC093534.1-201ENST00000504977 132 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 RNA5SP20-201ENST00000515976 84 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 SNORA18.6-201ENST00000516792 115 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 MIR5692C1-201ENST00000585309 91 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 AC087683.2-201ENST00000611384 326 ntBASIC-0.1□□□□□ -2.43
TRAV3A0A0B4J244 MIR377-201ENST00000362145 69 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-996P-201ENST00000365438 107 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 SNORA2B-201ENST00000384583 137 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 RNY3P9-201ENST00000384727 106 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-376P-201ENST00000384731 106 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 MTCYBP4-201ENST00000401524 249 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 PIGPP3-201ENST00000425307 415 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 Z82188.1-201ENST00000436709 154 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 RPL23AP54-201ENST00000495129 419 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 SNORA25.12-201ENST00000516202 82 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 AL355073.2-201ENST00000612106 557 ntBASIC-0.11□□□□□ -2.43
TRAV3A0A0B4J244 SNORD114-7-201ENST00000362520 77 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 RNA5SP214-201ENST00000363378 118 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-727P-201ENST00000363592 107 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MIR521-1-201ENST00000384902 87 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MIR520H-201ENST00000385126 88 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 SNORD71-201ENST00000411292 86 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MTCYBP8-201ENST00000422855 651 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 CYCSP46-201ENST00000423569 204 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MTCO2P16-201ENST00000436962 677 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AC116353.2-201ENST00000505332 712 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AC091885.1-201ENST00000506658 268 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 MIR2115-201ENST00000516657 100 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AC005828.6-201ENST00000606610 232 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 AC009248.2-201ENST00000619826 254 ntBASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.12□□□□□ -2.43
TRAV3A0A0B4J244 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 MT-TN-201ENST00000387400 73 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 SNORD100-201ENST00000408573 76 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 BX295541.1-201ENST00000417774 250 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms