Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MTCO2P11-201ENST00000431069 680 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 MTND4P18-201ENST00000447010 465 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 RPS29P15-201ENST00000458329 171 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AC079140.5-201ENST00000507882 310 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 RPL39P5-202ENST00000512505 151 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU2-69P-201ENST00000516061 100 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AP003181.2-201ENST00000528941 181 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 MTCO3P23-201ENST00000561363 289 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR5589-201ENST00000579442 60 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 FGF7P1-201ENST00000582820 288 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR4264-201ENST00000583520 66 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 AP000753.3-201ENST00000604083 169 ntBASIC-0.69□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU4-21P-201ENST00000362802 126 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 SNORD68-201ENST00000363214 84 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-393P-201ENST00000384475 107 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-125P-201ENST00000384505 107 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU4-30P-201ENST00000410245 143 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 ELOCP21-201ENST00000412558 336 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AL390729.2-201ENST00000416137 156 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AC133104.1-201ENST00000429100 218 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-897P-201ENST00000517135 105 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 MTND2P32-201ENST00000521584 1038 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AC022616.3-201ENST00000523940 148 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AC007751.1-201ENST00000529260 376 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 AC022306.3-201ENST00000619930 550 ntBASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.7□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-266P-201ENST00000364225 107 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 SNORA20B-201ENST00000384220 132 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-809P-201ENST00000384461 107 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR450B-201ENST00000401182 78 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 MTCO2P33-201ENST00000402100 465 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 ELOCP4-201ENST00000420090 333 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 MTND4P32-201ENST00000437189 1237 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 AC116353.2-201ENST00000505332 712 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-504P-201ENST00000516568 104 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 RNA5SP54-201ENST00000516951 92 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 AGGF1P4-201ENST00000568249 801 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR3681-201ENST00000580089 72 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 AC106754.1-201ENST00000562632 1513 ntBASIC-0.71□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 SNORD49B-201ENST00000365172 72 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-434P-201ENST00000384376 107 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-376P-201ENST00000384731 106 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR501-201ENST00000390204 84 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 POLR2KP2-201ENST00000438155 177 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 SUMO1P3-201ENST00000439961 304 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 ZNF114P1-201ENST00000453500 292 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 AC112204.1-201ENST00000502591 103 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNA5SP20-201ENST00000515976 84 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 RNU7-156P-201ENST00000517214 74 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 AC090617.3-201ENST00000573670 475 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR4752-201ENST00000579672 72 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 AC096720.1-201ENST00000604441 183 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 MIR4788-201ENST00000639104 80 ntBASIC-0.72□□□□□ -2.52
TRAV1-2A0A0B4J238 SNORD115-8-201ENST00000363856 82 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORD115-38-201ENST00000365037 82 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-117P-201ENST00000365415 107 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORD116-12-201ENST00000384468 92 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR224-201ENST00000384889 81 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORD70.1-201ENST00000391007 85 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR18B-201ENST00000454574 71 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 RNA5SP47-201ENST00000517230 109 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU2-60P-201ENST00000517290 128 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 AC018448.1-201ENST00000552843 316 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR4493-201ENST00000584016 73 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR548AD-201ENST00000584780 82 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 BNIP3P40-201ENST00000596017 556 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 AC126544.2-201ENST00000625174 749 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 AC013437.2-201ENST00000639587 677 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 AC091304.10-201ENST00000641554 121 ntBASIC-0.73□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR604-201ENST00000384880 94 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-735P-201ENST00000410612 107 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AC018865.2-201ENST00000423631 129 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND4P19-201ENST00000446659 478 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AC091885.1-201ENST00000506658 268 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-469P-201ENST00000516253 101 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORA18.4-201ENST00000516440 124 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AC069113.1-201ENST00000517763 267 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms