Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 U6.108-201ENST00000637764 58 ntBASIC1.99□□□□□ -2.09
PCDHGB3Q9Y5G1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHGB3Q9Y5G1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PCDHGB3Q9Y5G1 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 SNORD33-201ENST00000362761 85 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU4-50P-201ENST00000364361 141 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU6-407P-201ENST00000365280 104 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RNY1P14-201ENST00000384426 108 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RN7SKP200-201ENST00000410564 320 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC073910.1-201ENST00000445047 438 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 CHEK2P4-201ENST00000450340 246 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 snoU13.9-201ENST00000458927 103 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC097462.1-201ENST00000514125 324 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 MIR4709-201ENST00000577272 72 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AL390123.1-201ENST00000603216 237 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC240442.1-201ENST00000616055 283 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 MTND4P29-201ENST00000503122 1372 ntBASIC1.98□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU6-961P-201ENST00000363893 105 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 Y_RNA.419-201ENST00000384041 102 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AL355796.1-201ENST00000406706 323 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 RNA5SP20-201ENST00000515976 84 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU7-172P-201ENST00000517125 64 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU2-12P-201ENST00000517216 168 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 RNU7-128P-201ENST00000517247 62 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC027419.1-201ENST00000522976 328 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AP002001.1-203ENST00000534002 267 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC023157.2-201ENST00000540596 141 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC004467.1-201ENST00000615678 330 ntBASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
PCDHGB3Q9Y5G1 AC018630.2-201ENST00000534866 2403 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR369-201ENST00000362155 70 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU6-454P-201ENST00000364292 107 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 AL079342.1-201ENST00000401460 267 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 MRPL42P3-201ENST00000401492 326 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU2-54P-201ENST00000410299 190 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 SNORA25.10-201ENST00000515926 124 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 RN7SKP295-201ENST00000517264 153 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 AC006026.1-201ENST00000444025 1803 ntBASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
PCDHGB3Q9Y5G1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU1-22P-201ENST00000363334 158 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU6-20P-201ENST00000384106 107 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR1302-11-201ENST00000408051 138 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR1302-9-201ENST00000408365 138 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR1302-10-201ENST00000408734 138 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MCFD2P1-201ENST00000417812 300 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 SNORA28-201ENST00000606769 126 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 MIR1302-2-201ENST00000607096 138 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 AC005592.1-201ENST00000566527 1640 ntBASIC1.95□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU6-626P-201ENST00000363354 107 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 Y_RNA.128-201ENST00000363391 112 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 SNORD14.1-201ENST00000365609 90 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 AC245047.3-201ENST00000429428 127 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 HSPE1P13-201ENST00000451143 297 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU7-34P-201ENST00000459394 64 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 U8.20-201ENST00000459445 131 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 RPS26P55-201ENST00000471178 356 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 AC073413.2-201ENST00000604332 360 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 SNORD58B-201ENST00000607313 66 ntBASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PCDHGB3Q9Y5G1 ZNF72P-201ENST00000425869 1908 ntBASIC1.93□□□□□ -2.1
PCDHGB3Q9Y5G1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms