Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RNU6-933P-201ENST00000384424 107 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-159P-201ENST00000391080 106 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AL590002.1-201ENST00000406554 418 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 ZNF885P-201ENST00000420174 1098 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 CYCTP-201ENST00000504253 315 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC093303.1-201ENST00000514549 295 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC091144.1-201ENST00000519573 138 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AL358944.1-201ENST00000528537 144 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC073544.1-201ENST00000600110 1595 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC109347.2-201ENST00000610220 349 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC006504.8-201ENST00000621046 635 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 AC010487.4-201ENST00000637027 61 ntBASIC0.17□□□□□ -2.38
HDGFL3Q9Y3E1 RNU5F-3P-201ENST00000363767 117 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-280P-201ENST00000364145 104 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 Y_RNA.378-201ENST00000365652 113 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 SNORA20B-201ENST00000384220 132 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1297P-201ENST00000384415 104 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 MTCO1P20-201ENST00000425366 358 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU7-41P-201ENST00000515917 61 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 SNORA19.2-201ENST00000516013 114 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1038P-201ENST00000516516 104 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU6-1291P-201ENST00000516591 104 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 RNU11-2P-201ENST00000516898 142 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 MTCO2P4-201ENST00000517968 247 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 PIGPP4-201ENST00000584447 307 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 AC007494.3-201ENST00000624660 743 ntBASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
HDGFL3Q9Y3E1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
HDGFL3Q9Y3E1 MIR452-201ENST00000385020 85 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 MT-TH-201ENST00000387441 69 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-994P-201ENST00000410507 111 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 SNORA74.3-201ENST00000517108 154 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 AC120024.3-201ENST00000603167 156 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 AC009248.2-201ENST00000619826 254 ntBASIC0.15□□□□□ -2.39
HDGFL3Q9Y3E1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 Y_RNA.179-201ENST00000363844 90 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-38P-201ENST00000384085 107 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 MIR520C-201ENST00000385005 87 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 Y_RNA.654-201ENST00000497848 106 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 MIR3684-201ENST00000579779 74 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
HDGFL3Q9Y3E1 Y_RNA.167-201ENST00000363735 109 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 SNORD113-7-201ENST00000363762 77 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 SNORD113.3-201ENST00000364630 78 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-1103P-201ENST00000384150 107 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-376P-201ENST00000384731 106 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 SNORA26.8-201ENST00000391306 124 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AL365203.2-201ENST00000423444 196 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AC018865.2-201ENST00000423631 129 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AL353572.1-201ENST00000442490 417 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AC091885.1-201ENST00000506658 268 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RNA5SP20-201ENST00000515976 84 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 UBL5P4-201ENST00000562584 236 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RN7SL793P-201ENST00000583259 296 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AC007684.1-201ENST00000609671 477 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AC010999.1-201ENST00000611856 324 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 AL138726.1-201ENST00000614873 333 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 FAM157A-202ENST00000615155 405 ntBASIC0.13□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 SNORA27.1-201ENST00000362604 124 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 RNA5SP48-201ENST00000363969 126 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 MIR520G-201ENST00000385064 90 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 CALM2P3-201ENST00000400429 449 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 MIR1298-201ENST00000408783 112 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 RNU2-70P-201ENST00000410718 179 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 MTCO2P19-201ENST00000427513 598 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AL392103.1-201ENST00000447000 198 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AC018710.1-201ENST00000506509 158 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 SNORA40.12-201ENST00000516329 111 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-1332P-201ENST00000516666 104 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AC023442.1-201ENST00000531247 422 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AC104695.3-201ENST00000604052 296 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AL136370.1-201ENST00000608166 691 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 AC073534.2-201ENST00000620377 381 ntBASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.12□□□□□ -2.39
HDGFL3Q9Y3E1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.11□□□□□ -2.39
HDGFL3Q9Y3E1 RNU6-117P-201ENST00000365415 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms