Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 AC092881.1-201ENST00000638218 2733 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 AC009487.4-201ENST00000624969 3585 ntBASIC2.53□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.277-201ENST00000364754 102 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.418-201ENST00000384029 102 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-1248P-201ENST00000391096 64 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 MIR1185-2-201ENST00000408687 86 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 U3.40-201ENST00000408706 208 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 SUMO1P2-201ENST00000452524 304 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 AC016925.1-201ENST00000458303 298 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 RNU7-57P-201ENST00000459540 60 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-966P-201ENST00000516479 104 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 AL512605.2-201ENST00000592972 256 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 MIR6873-201ENST00000622788 63 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
SSX2IPQ9Y2D8 RNU1-23P-201ENST00000363361 144 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.243-201ENST00000364481 109 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-338P-201ENST00000383888 105 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-975P-201ENST00000384296 105 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.539-201ENST00000384635 107 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-907P-201ENST00000390924 102 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 AC024067.1-201ENST00000426199 223 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 MTCO1P5-201ENST00000433573 344 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 MRPS10P1-201ENST00000448483 130 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 HMGN2P18-201ENST00000450680 270 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNU4-71P-201ENST00000516258 113 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-948P-201ENST00000516374 107 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 SNORA27.4-201ENST00000516650 95 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 RNA5SP490-201ENST00000517141 136 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX2IPQ9Y2D8 UBE2WP1-201ENST00000362030 340 ntBASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-324P-201ENST00000363957 106 ntBASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 AC091959.1-201ENST00000495857 238 ntBASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-436P-201ENST00000516171 114 ntBASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 snoZ196.1-201ENST00000625269 89 ntBASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSX2IPQ9Y2D8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.65-201ENST00000362846 100 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 SNORD115-30-201ENST00000364117 82 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 RNU2-34P-201ENST00000516534 121 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 AL162424.1-201ENST00000602325 221 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 DEFB117-201ENST00000602356 141 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 U6.115-201ENST00000636045 103 ntBASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSX2IPQ9Y2D8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 AL596028.1-201ENST00000326971 197 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 RNY1-201ENST00000364228 113 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 Y_RNA.275-201ENST00000364726 110 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 AL137159.1-201ENST00000452808 512 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 RPL21P9-201ENST00000556149 474 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 AC009779.6-201ENST00000603972 165 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
SSX2IPQ9Y2D8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU4-80P-201ENST00000363200 141 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-743P-201ENST00000364151 106 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-740P-201ENST00000364734 105 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 AL031003.1-201ENST00000404229 172 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-710P-201ENST00000410424 105 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU2-48P-201ENST00000410694 191 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-498P-201ENST00000459468 107 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-221P-201ENST00000459541 99 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 AC093259.1-201ENST00000509755 300 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RNU6-191P-201ENST00000516295 94 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 MIR3145-201ENST00000580727 82 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 AC005828.6-201ENST00000606610 232 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.47□□□□□ -2.01
SSX2IPQ9Y2D8 SNORD114-7-201ENST00000362520 77 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.269-201ENST00000364685 89 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-200P-201ENST00000364743 107 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 AC123900.1-201ENST00000420390 96 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 SNORA70.12-201ENST00000516084 153 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-667P-201ENST00000517186 102 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms