Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MTCO1P19-201ENST00000443487 500 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 AC018710.1-201ENST00000506509 158 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 RNU4-57P-201ENST00000515980 135 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 RPL21P9-201ENST00000556149 474 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 PIGPP4-201ENST00000584447 307 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 AC068137.4-201ENST00000638485 296 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
HHLA3Q9XRX5 RNU6-280P-201ENST00000364145 104 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU6-522P-201ENST00000364497 107 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 SNORA69-201ENST00000383895 132 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 SNORA75-201ENST00000384158 137 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNY1P14-201ENST00000384426 108 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 MIR562-201ENST00000384894 95 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 MIR514A2-201ENST00000385131 88 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 MIR514A3-201ENST00000385132 88 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 CALM2P3-201ENST00000400429 449 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 MIR891A-201ENST00000401237 79 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU5A-5P-201ENST00000411054 116 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 ZNF885P-201ENST00000420174 1098 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC018865.2-201ENST00000423631 129 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 MTCYBP10-201ENST00000424905 650 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC083904.1-201ENST00000487828 231 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC091885.1-201ENST00000506658 268 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC011195.1-201ENST00000578177 177 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 SNORA4-201ENST00000584302 138 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 RNU6-94P-201ENST00000607728 107 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 AC121333.1-201ENST00000567488 2709 ntBASIC0.26□□□□□ -2.37
HHLA3Q9XRX5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-254P-201ENST00000363377 107 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-163P-201ENST00000384396 106 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-1297P-201ENST00000384415 104 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-376P-201ENST00000384731 106 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 MIR518E-201ENST00000385252 88 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 MIR936-201ENST00000401264 98 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 MTND1P11-201ENST00000456661 876 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC083798.1-201ENST00000472671 131 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU7-41P-201ENST00000515917 61 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNA5SP20-201ENST00000515976 84 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 RNU6-107P-201ENST00000516643 102 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC010620.1-201ENST00000601088 1102 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC073648.5-201ENST00000603502 305 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC087752.4-201ENST00000605911 462 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AP001330.5-201ENST00000607176 411 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 AC134026.1-201ENST00000623249 2239 ntBASIC0.25□□□□□ -2.37
HHLA3Q9XRX5 Y_RNA.296-201ENST00000364930 108 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 RNU6-407P-201ENST00000365280 104 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 PIGPP3-201ENST00000425307 415 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 NDUFA5P4-201ENST00000436704 385 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 PCMTD1P1-201ENST00000455560 355 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 RPS3AP17-201ENST00000472594 777 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 RN7SKP164-201ENST00000516138 266 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 RNU6-405P-201ENST00000516637 110 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AC036111.3-201ENST00000526389 112 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AC023442.1-201ENST00000531247 422 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 MIR4711-201ENST00000578274 70 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AC120024.3-201ENST00000603167 156 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AC010999.1-201ENST00000611856 324 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 AC100810.6-201ENST00000638068 285 ntBASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
HHLA3Q9XRX5 SNORA27.1-201ENST00000362604 124 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 Y_RNA.372-201ENST00000365599 102 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 Y_RNA.409-201ENST00000383990 98 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU6-95P-201ENST00000384697 107 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU6-648P-201ENST00000410190 107 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU4-55P-201ENST00000410731 137 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AL590632.1-201ENST00000424289 371 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AL137792.2-201ENST00000443484 235 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 CYCTP-201ENST00000504253 315 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 RNU6-835P-201ENST00000516974 104 ntBASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.23□□□□□ -2.37
HHLA3Q9XRX5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms