Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RNU6-879P-201ENST00000364328 108 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNU6-596P-201ENST00000365395 98 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNY3P14-201ENST00000384309 102 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.529-201ENST00000384586 119 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 MIR329-1-201ENST00000385028 80 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SMC3Q9UQE7 FGF7P8-201ENST00000402994 292 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 EIF1P2-201ENST00000428233 350 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC098614.3-201ENST00000438957 440 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNU6-221P-201ENST00000459541 99 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC022493.2-201ENST00000506122 481 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNU6-559P-201ENST00000516151 98 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNU6-966P-201ENST00000516479 104 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.706-201ENST00000516933 99 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC134698.4-201ENST00000523451 826 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.31□□□□□ -2.2
SMC3Q9UQE7 MIR3937-201ENST00000580135 106 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 HSPE1P19-201ENST00000603327 295 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AC011476.5-201ENST00000615594 130 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
SMC3Q9UQE7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SMC3Q9UQE7 RNU5F-3P-201ENST00000363767 117 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNU6-280P-201ENST00000364145 104 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNU6-1240P-201ENST00000365155 104 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNU6-793P-201ENST00000384233 104 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNA5SP323-201ENST00000391094 133 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 ELOCP21-201ENST00000412558 336 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 MRPL35P3-201ENST00000421557 364 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 USMG5P1-201ENST00000425964 177 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC108729.3-201ENST00000513484 108 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC046134.1-201ENST00000514454 666 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 RNU7-128P-201ENST00000517247 62 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC004584.2-201ENST00000570407 410 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC010999.1-201ENST00000611856 324 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.3□□□□□ -2.2
SMC3Q9UQE7 PISRT1.1-201ENST00000616930 107 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC087588.2-201ENST00000617667 426 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC104985.2-201ENST00000620598 500 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 AC092794.2-201ENST00000620933 563 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 MIR1302-1-201ENST00000637932 143 ntBASIC1.3□□□□□ -2.2
SMC3Q9UQE7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 SNORA12.1-201ENST00000390873 148 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 NDUFB4P10-201ENST00000452541 359 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AL355375.2-201ENST00000574825 175 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AC100812.1-201ENST00000607622 580 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 AL132765.2-201ENST00000610812 351 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.29□□□□□ -2.2
SMC3Q9UQE7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 U3.8-201ENST00000363675 217 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.356-201ENST00000365475 113 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AL355796.1-201ENST00000406706 323 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 MIR1185-2-201ENST00000408687 86 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
SMC3Q9UQE7 MTND4P18-201ENST00000447010 465 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.635-201ENST00000459041 101 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 PRDX4P1-201ENST00000507189 574 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 Y_RNA.661-201ENST00000516003 99 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 SNORA31.10-201ENST00000516482 106 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 RNU6-875P-201ENST00000516488 106 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 RNU1-142P-201ENST00000516682 145 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AL121579.1-201ENST00000555129 305 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AC022217.4-201ENST00000604389 163 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
SMC3Q9UQE7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNY1P10-201ENST00000363268 113 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 Y_RNA.166-201ENST00000363730 102 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNU6-454P-201ENST00000364292 107 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNU6-950P-201ENST00000384651 107 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 MIR513A1-201ENST00000385138 129 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RNU1-139P-201ENST00000391307 165 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 RPL23AP36-201ENST00000413895 458 ntBASIC1.27□□□□□ -2.21
SMC3Q9UQE7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.27□□□□□ -2.21
SMC3Q9UQE7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms