Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU1-17P-201ENST00000363022 152 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 RNU6-937P-201ENST00000384325 106 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 SNORD115-46-201ENST00000390982 71 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 AC096920.1-201ENST00000423991 241 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 LINC01399-202ENST00000458450 244 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 AC110588.1-201ENST00000559699 137 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 AL109918.3-201ENST00000603072 338 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 snoZ196.1-201ENST00000625269 89 ntBASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDK11AQ9UQ88 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AL359851.1-201ENST00000569460 4997 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 RNU6-196P-201ENST00000384315 107 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 RNU6-21P-201ENST00000384710 107 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 MIR676-201ENST00000390702 67 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 RPL23AP36-201ENST00000413895 458 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 SEPT14P8-201ENST00000508026 178 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 RNU7-110P-201ENST00000516891 62 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AP003733.2-201ENST00000529409 171 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AC136932.1-201ENST00000574771 208 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 MIR3684-201ENST00000579779 74 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 MIR4423-201ENST00000580922 80 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 MIR4300-201ENST00000581016 96 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AC006380.1-201ENST00000603598 186 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 AC004467.1-201ENST00000615678 330 ntBASIC3.12□□□□□ -1.91
CDK11AQ9UQ88 RNU6-1175P-201ENST00000365200 107 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 RNU6-1235P-201ENST00000384559 107 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 Y_RNA.556-201ENST00000384677 113 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 Y_RNA.570-201ENST00000384750 101 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 MIR1185-2-201ENST00000408687 86 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 AL158823.1-201ENST00000418441 478 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 AL357134.1-201ENST00000445848 426 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 RNU6-498P-201ENST00000459468 107 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 SNORD113-5-201ENST00000607261 78 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDK11AQ9UQ88 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 Y_RNA.64-201ENST00000362845 102 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 Y_RNA.144-201ENST00000363521 113 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 MIR1283-2-201ENST00000408621 87 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 RNU2-20P-201ENST00000410425 191 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 RPL23AP3-201ENST00000453844 468 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 MIR5002-201ENST00000584713 97 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 AL627230.6-201ENST00000611129 280 ntBASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK11AQ9UQ88 RNU6-418P-201ENST00000384035 107 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 RNU6-463P-201ENST00000384340 107 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 RNU6-221P-201ENST00000459541 99 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 7SK.10-201ENST00000621414 298 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 MIR8062-201ENST00000621515 85 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 AC091932.3-201ENST00000624223 323 ntBASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK11AQ9UQ88 RNU1-58P-201ENST00000362413 163 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 RNU6-1266P-201ENST00000362794 105 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 SNORD113-8-201ENST00000363497 74 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 RNU6-806P-201ENST00000365147 105 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 SNORA40.18-201ENST00000391200 128 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 MIR1302-6-201ENST00000408466 90 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 RNU6-57P-201ENST00000411348 103 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 AC008134.1-201ENST00000420943 193 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 BX510359.4-201ENST00000423750 193 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 HMGN2P19-201ENST00000425149 265 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 AC005042.3-201ENST00000453230 174 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 AL161670.1-201ENST00000554348 137 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 AC022441.3-201ENST00000605737 136 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 AC006001.4-201ENST00000622243 395 ntBASIC3.08□□□□□ -1.92
CDK11AQ9UQ88 RNU4-90P-201ENST00000362773 141 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.140-201ENST00000363474 103 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 RNU6-160P-201ENST00000384591 107 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 RNU2-54P-201ENST00000410299 190 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 RNU6-121P-201ENST00000410525 99 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 MTCO1P44-201ENST00000441935 243 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 AC016717.1-201ENST00000448918 286 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 SUMO1P2-201ENST00000452524 304 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 AC010531.2-201ENST00000465012 153 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 AC087441.2-201ENST00000529141 262 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 AC008749.1-201ENST00000597650 306 ntBASIC3.07□□□□□ -1.92
CDK11AQ9UQ88 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.105-201ENST00000363182 111 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.222-201ENST00000364264 102 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.331-201ENST00000365267 102 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.581-201ENST00000391017 97 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.602-201ENST00000410535 92 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 AC139712.2-201ENST00000424302 339 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms