Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL136360.1-201ENST00000503377 1900 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX41Q9UJV9 RNU6-1020P-201ENST00000363684 107 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 RNU1-91P-201ENST00000364746 163 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 MTCO2P33-201ENST00000402100 465 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 AC016909.1-201ENST00000415916 166 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX41Q9UJV9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 RNU1-131P-201ENST00000458943 161 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 SNORD109B-201ENST00000458961 67 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 SNORD109A-201ENST00000459128 67 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 AC010409.1-201ENST00000487382 476 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 SUMO2P18-201ENST00000518873 252 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 CYCSP26-201ENST00000534107 320 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 MIR3126-201ENST00000577443 74 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 AC004792.1-201ENST00000614523 137 ntBASIC3.17□□□□□ -1.9
DDX41Q9UJV9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX41Q9UJV9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX41Q9UJV9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 MIR518C-201ENST00000384822 101 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AL138827.1-201ENST00000402666 306 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 HMGN2P34-201ENST00000437647 269 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 RNU6-1278P-201ENST00000516130 107 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 MIR5692C2-201ENST00000577959 77 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AC011921.3-201ENST00000605540 361 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AC013791.1-201ENST00000616619 62 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AL365265.1-201ENST00000621045 234 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 AC010297.1-201ENST00000623948 149 ntBASIC3.16□□□□□ -1.9
DDX41Q9UJV9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX41Q9UJV9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
DDX41Q9UJV9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
DDX41Q9UJV9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RNU1-35P-201ENST00000362782 153 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RNU6-443P-201ENST00000384780 107 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 SNORA26.5-201ENST00000391215 123 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RPS20P10-201ENST00000451209 253 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U8.19-201ENST00000459095 133 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RPS29P21-201ENST00000496272 170 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 AC011406.1-201ENST00000512440 370 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 AP002392.1-201ENST00000537692 208 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 CBX3P4-201ENST00000538909 354 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 MIR4438-201ENST00000585271 93 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.15-201ENST00000611544 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.16-201ENST00000613119 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.12-201ENST00000613778 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.20-201ENST00000613956 192 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.9-201ENST00000615427 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.11-201ENST00000616345 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.2-201ENST00000616535 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.3-201ENST00000617785 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.19-201ENST00000618602 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 RNU2-1-201ENST00000618664 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.6-201ENST00000619225 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.5-201ENST00000619465 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 U2.10-201ENST00000620268 191 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.15□□□□□ -1.91
DDX41Q9UJV9 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
DDX41Q9UJV9 MIR340-201ENST00000362125 95 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 Y_RNA.270-201ENST00000364693 104 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 Y_RNA.293-201ENST00000364908 93 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 RNU11-5P-201ENST00000391216 129 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AL135790.2-201ENST00000437701 267 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 RPL36AP21-201ENST00000490372 323 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AC068647.2-201ENST00000637380 353 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AC245060.5-201ENST00000610778 3293 ntBASIC3.14□□□□□ -1.91
DDX41Q9UJV9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX41Q9UJV9 AL356292.1-201ENST00000283110 373 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 RNU4-13P-201ENST00000364019 141 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 Y_RNA.308-201ENST00000365043 101 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 AL355497.1-201ENST00000406262 551 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 MIR1262-201ENST00000408276 93 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 RNA5SP21-201ENST00000410917 96 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 AC060773.1-201ENST00000421698 310 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 AL353689.1-201ENST00000438895 199 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 RNU7-141P-201ENST00000459304 62 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 RN7SL636P-201ENST00000497504 294 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 RNU7-116P-201ENST00000516940 62 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 AC005972.2-201ENST00000604690 348 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX41Q9UJV9 AC134026.1-201ENST00000623249 2239 ntBASIC3.13□□□□□ -1.91
DDX41Q9UJV9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
DDX41Q9UJV9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX41Q9UJV9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 611.2 ms