Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 FCF1P8-201ENST00000510322 597 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 U4atac.1-201ENST00000618345 95 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.66-201ENST00000362862 102 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 RNU6-1064P-201ENST00000410626 104 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 RNA5SP127-201ENST00000411051 133 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 AC091826.1-201ENST00000514065 313 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 RNU6-504P-201ENST00000516568 104 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 RNU1-142P-201ENST00000516682 145 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 AC087685.1-201ENST00000587507 141 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 MIR6079-201ENST00000635807 62 ntBASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
FOXD3Q9UJU5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNU6-44P-201ENST00000384045 107 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.486-201ENST00000384398 107 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNU6-160P-201ENST00000384591 107 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 AL031121.1-201ENST00000406553 254 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 EDDM3CP-201ENST00000415977 425 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 SNRPGP10-201ENST00000432323 225 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNU7-94P-201ENST00000459576 63 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNU6-1041P-201ENST00000516254 102 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 SNORA74D-201ENST00000516404 141 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 SNORA18.4-201ENST00000516440 124 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.714-201ENST00000517065 90 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 AC024995.1-201ENST00000523014 93 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 MIR3121-201ENST00000579680 77 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 U6.95-201ENST00000636931 70 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 MIR3914-2-201ENST00000637339 95 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 CEP170P1-201ENST00000502249 4587 ntBASIC3.22□□□□□ -1.89
FOXD3Q9UJU5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
FOXD3Q9UJU5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
FOXD3Q9UJU5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 Y_RNA.253-201ENST00000364562 112 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RNA5SP125-201ENST00000364843 120 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RNU6-476P-201ENST00000384726 107 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 AL158147.1-201ENST00000443970 75 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 ATP5J2P3-201ENST00000451550 258 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RN7SL807P-201ENST00000470923 297 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 NDUFA4P2-201ENST00000489989 244 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RNU6-772P-201ENST00000516042 105 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 AC007536.1-201ENST00000533382 349 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 RMST_8.1-201ENST00000610287 165 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXD3Q9UJU5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNA5SP267-201ENST00000364893 126 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 Y_RNA.294-201ENST00000364916 102 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNA5SP467-201ENST00000391274 118 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNU2-52P-201ENST00000410680 190 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC009238.1-201ENST00000442165 424 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC009237.6-201ENST00000446969 424 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC233266.1-201ENST00000454518 96 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RPS26P45-201ENST00000471748 340 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNU6-1291P-201ENST00000516591 104 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC242852.1-201ENST00000612151 96 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC244015.1-201ENST00000622301 99 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AP003355.3-201ENST00000623465 114 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 ZNF271P-202ENST00000465539 1970 ntBASIC3.2□□□□□ -1.9
FOXD3Q9UJU5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 SNORD9-201ENST00000362566 104 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 RNU6-235P-201ENST00000362644 107 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 RNU6-647P-201ENST00000364243 107 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 RNU6-1144P-201ENST00000384247 104 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 RN7SKP284-201ENST00000411002 343 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 MLLT10P1-201ENST00000418346 262 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXD3Q9UJU5 MRPS17P9-201ENST00000511924 393 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms