Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC026585.1-201ENST00000619582 524 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 AL162376.1-201ENST00000624117 175 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 AL008636.1-201ENST00000625038 1018 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 AC005592.1-201ENST00000566527 1640 ntBASIC-1.17□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 MIR452-201ENST00000385020 85 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 MTCO2P33-201ENST00000402100 465 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 RNU7-73P-201ENST00000458743 63 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 SNORA13-201ENST00000458790 133 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 AC010486.2-201ENST00000505572 483 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 AC103996.1-201ENST00000555468 102 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 AC006380.1-201ENST00000603598 186 ntBASIC-1.18□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 RNU6-24P-201ENST00000384440 107 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC008134.1-201ENST00000420943 193 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 BTBD7P2-201ENST00000441962 620 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC008628.2-201ENST00000502605 298 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 RNU6-677P-201ENST00000516914 101 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC068587.5-201ENST00000528506 175 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 MIR5006-201ENST00000583027 110 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 uc_338.4-201ENST00000616635 176 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC231657.1-201ENST00000624313 397 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AP001189.2-201ENST00000527320 189 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AP003168.1-201ENST00000530091 307 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 MIR3146-201ENST00000580367 79 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC112204.3-201ENST00000623822 332 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 AC010608.3-201ENST00000625048 527 ntBASIC-1.19□□□□□ -2.6
SCN11AQ9UI33 RNU6-873P-201ENST00000363833 107 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 SNORA26.5-201ENST00000391215 123 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 MIR876-201ENST00000401147 81 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 MIR1285-2-201ENST00000408311 88 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 AC119751.4-201ENST00000507498 357 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 MIR548AR-201ENST00000582191 57 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 MIR4639-201ENST00000584938 69 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 AC010205.1-201ENST00000616668 449 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 AL157770.1-201ENST00000623049 439 ntBASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.2□□□□□ -2.6
SCN11AQ9UI33 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RNU6-673P-201ENST00000365084 104 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 SNORD14.1-201ENST00000365609 90 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 MIR215-201ENST00000384858 110 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 SUMO1P2-201ENST00000452524 304 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RNU7-185P-201ENST00000459215 60 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AP002004.2-201ENST00000531656 154 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC084368.1-201ENST00000620935 65 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC005609.4-201ENST00000625071 447 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 SNORD45.3-201ENST00000363836 72 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RNU2-54P-201ENST00000410299 190 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC243428.1-201ENST00000421099 264 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC108747.1-201ENST00000609508 535 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RMST_10.1-201ENST00000616309 154 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 AC244669.1-204ENST00000621564 178 ntBASIC-1.21□□□□□ -2.6
SCN11AQ9UI33 RNU4-21P-201ENST00000362802 126 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 RNU6-428P-201ENST00000362942 107 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 RNU6-371P-201ENST00000364283 108 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 RNU6-549P-201ENST00000384433 107 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 ZNF114P1-201ENST00000453500 292 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 AL358944.1-201ENST00000528537 144 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 FGF7P1-201ENST00000582820 288 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 AL139022.2-201ENST00000606934 443 ntBASIC-1.22□□□□□ -2.6
SCN11AQ9UI33 SNORD56.4-201ENST00000363883 71 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 AL049829.1-201ENST00000465411 156 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 AC104563.1-201ENST00000476147 376 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 PRDX4P1-201ENST00000507189 574 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 RNU2-56P-201ENST00000516826 190 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 MIR4280-201ENST00000582178 76 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 AC016597.2-201ENST00000613256 341 ntBASIC-1.23□□□□□ -2.61
SCN11AQ9UI33 RNU6-47P-201ENST00000383866 107 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-692P-201ENST00000384496 107 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC012306.1-201ENST00000423267 114 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC010493.1-201ENST00000513479 292 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-377P-201ENST00000515965 102 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 RNU6-504P-201ENST00000516568 104 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 AC097478.2-201ENST00000610572 514 ntBASIC-1.24□□□□□ -2.61
SCN11AQ9UI33 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms