Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MIR643-201ENST00000385267 97 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MIR450B-201ENST00000401182 78 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MIR892B-201ENST00000401279 77 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AL049545.1-201ENST00000401856 572 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MTND3P9-201ENST00000429526 346 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MTND4P18-201ENST00000447010 465 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 SNORD123-201ENST00000459473 70 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AL355375.2-201ENST00000574825 175 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 AC090897.1-201ENST00000580909 226 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MIR4676-201ENST00000583078 72 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 MIR4762-201ENST00000585261 75 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.41□□□□□ -2.48
COMMD3Q9UBI1 RNA5SP325-201ENST00000363756 130 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNU6-396P-201ENST00000365369 105 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 MIR487A-201ENST00000385009 80 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNU6-747P-201ENST00000390928 104 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNU6-241P-201ENST00000391148 104 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNA5SP127-201ENST00000411051 133 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 AC098592.1-201ENST00000419352 333 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 AC104850.1-201ENST00000435940 476 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 SCARNA18-201ENST00000459004 134 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 SNORD4A-201ENST00000459174 72 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RNU7-138P-201ENST00000459479 64 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 U8.21-201ENST00000459536 136 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 HMGN1P10-201ENST00000474557 553 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 RPL17P19-201ENST00000489069 552 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 MIR4771-2-201ENST00000577758 74 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 MIR4771-1-201ENST00000582617 74 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 AL049777.1-201ENST00000622740 518 ntBASIC-0.42□□□□□ -2.48
COMMD3Q9UBI1 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 SNORA36.1-201ENST00000363424 132 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 RNU6-501P-201ENST00000364072 100 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 RNU6-376P-201ENST00000384731 106 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 RNU2-72P-201ENST00000411175 163 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 MTND4P33-201ENST00000556706 766 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 AC010525.2-201ENST00000590920 195 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 AC005176.2-201ENST00000596933 147 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 AL158211.2-201ENST00000607282 395 ntBASIC-0.43□□□□□ -2.48
COMMD3Q9UBI1 AC121333.1-201ENST00000567488 2709 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 SNORD45.3-201ENST00000363836 72 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 SNORD73A-201ENST00000386062 65 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AL365184.2-201ENST00000431139 435 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 GPR143P-201ENST00000434155 205 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 MTND1P26-201ENST00000440488 538 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AC105417.1-201ENST00000514691 285 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 Vault.3-201ENST00000516676 95 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 RNU6-63P-201ENST00000516690 95 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 MTND1P35-201ENST00000526739 508 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AC022878.1-201ENST00000530684 149 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AC012433.1-201ENST00000588916 398 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AF250324.2-201ENST00000608299 610 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AC022306.3-201ENST00000619930 550 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 AL607023.1-201ENST00000620045 248 ntBASIC-0.44□□□□□ -2.48
COMMD3Q9UBI1 MTND4P12-201ENST00000498999 1377 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 RNU6-108P-201ENST00000365558 107 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 SNORA20B-201ENST00000384220 132 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 AC018865.2-201ENST00000423631 129 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 MTCO2P11-201ENST00000431069 680 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 AL353572.1-201ENST00000442490 417 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 RPS29P15-201ENST00000458329 171 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 MTND1P8-201ENST00000571424 950 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 AC018714.1-201ENST00000605028 208 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 AC020891.4-201ENST00000605745 93 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 AC098679.4-201ENST00000624241 654 ntBASIC-0.45□□□□□ -2.48
COMMD3Q9UBI1 RNU6-117P-201ENST00000365415 107 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 RNU6-784P-201ENST00000384330 106 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 MIR106A-201ENST00000384870 81 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 MIR938-201ENST00000401216 83 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 SUMO1P2-201ENST00000452524 304 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 AC091885.1-201ENST00000506658 268 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 SNORA25.14-201ENST00000516481 132 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.46□□□□□ -2.48
COMMD3Q9UBI1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms