Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-163P-201ENST00000384396 106 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 CALM2P3-201ENST00000400429 449 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 AC018865.2-201ENST00000423631 129 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 RNU6-261P-201ENST00000459506 102 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 MTND4LP26-201ENST00000518144 282 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 RNU6-94P-201ENST00000607728 107 ntBASIC0.36□□□□□ -2.35
VAPAQ9P0L0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
VAPAQ9P0L0 AC121333.1-201ENST00000567488 2709 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 SNORA25.9-201ENST00000365087 128 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 RNU6-128P-201ENST00000383976 107 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 SNORA36.2-201ENST00000384004 127 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 RNU6-1297P-201ENST00000384415 104 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC244098.3-201ENST00000424803 96 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 PIGPP3-201ENST00000425307 415 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 MTCO1P19-201ENST00000443487 500 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 RPS20P10-201ENST00000451209 253 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC067940.1-201ENST00000458411 300 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC083798.1-201ENST00000472671 131 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 Y_RNA.695-201ENST00000516715 107 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
VAPAQ9P0L0 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AP001330.5-201ENST00000607176 411 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 AC097520.1-201ENST00000624435 385 ntBASIC0.35□□□□□ -2.35
VAPAQ9P0L0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
VAPAQ9P0L0 RNA5SP347-201ENST00000362445 119 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 RNU6-254P-201ENST00000363377 107 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 Y_RNA.409-201ENST00000383990 98 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 SNORA75-201ENST00000384158 137 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 MIR514A2-201ENST00000385131 88 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 MIR514A3-201ENST00000385132 88 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 MIR1185-1-201ENST00000408598 86 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 MIR548J-201ENST00000408833 112 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.34□□□□□ -2.36
VAPAQ9P0L0 DAP3P1-201ENST00000441522 278 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 RN7SKP298-201ENST00000515950 94 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 ACA59.1-201ENST00000515966 143 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AC134698.4-201ENST00000523451 826 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AP003716.2-201ENST00000528260 108 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AC120024.3-201ENST00000603167 156 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 AL136317.1-201ENST00000612653 226 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 Z69908.1-201ENST00000622603 247 ntBASIC0.34□□□□□ -2.36
VAPAQ9P0L0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.34□□□□□ -2.36
VAPAQ9P0L0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VAPAQ9P0L0 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 RNU6-994P-201ENST00000410507 111 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 MTCYBP10-201ENST00000424905 650 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 CYCTP-201ENST00000504253 315 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 RNU6-1278P-201ENST00000516130 107 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 Y_RNA.683-201ENST00000516508 93 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 AC023442.1-201ENST00000531247 422 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.33□□□□□ -2.36
VAPAQ9P0L0 MIR6788-201ENST00000618842 66 ntBASIC0.33□□□□□ -2.36
VAPAQ9P0L0 SNORA27.1-201ENST00000362604 124 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU6-1322P-201ENST00000364309 107 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU6-522P-201ENST00000364497 107 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU6-136P-201ENST00000384663 107 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU6-95P-201ENST00000384697 107 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 MIR517A-201ENST00000385001 87 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 MTCYBP4-201ENST00000401524 249 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU5A-5P-201ENST00000411054 116 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 AL590632.1-201ENST00000424289 371 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 RNU7-41P-201ENST00000515917 61 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 MIR151B-201ENST00000584249 96 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.32□□□□□ -2.36
VAPAQ9P0L0 AC100810.6-201ENST00000638068 285 ntBASIC0.32□□□□□ -2.36
VAPAQ9P0L0 MTND5P16-201ENST00000460269 1703 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 RNU6-1252P-201ENST00000363054 104 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 SNORD68-201ENST00000363214 84 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 Y_RNA.231-201ENST00000364358 102 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 Y_RNA.372-201ENST00000365599 102 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 MIR520C-201ENST00000385005 87 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 MIR452-201ENST00000385020 85 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 MIR520G-201ENST00000385064 90 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 MTND1P11-201ENST00000456661 876 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 RNU6-956P-201ENST00000458868 103 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 AC114811.1-201ENST00000507207 168 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 RNU6-1096P-201ENST00000517089 102 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 AC027279.3-201ENST00000625055 122 ntBASIC0.31□□□□□ -2.36
VAPAQ9P0L0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
VAPAQ9P0L0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 MIR1298-201ENST00000408783 112 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 AL137792.2-201ENST00000443484 235 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.3□□□□□ -2.36
VAPAQ9P0L0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.3□□□□□ -2.36
VAPAQ9P0L0 RNU7-175P-201ENST00000515915 61 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 RNU6-835P-201ENST00000516974 104 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 AC036111.3-201ENST00000526389 112 ntBASIC0.3□□□□□ -2.36
VAPAQ9P0L0 AL358944.1-201ENST00000528537 144 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms