Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-766P-201ENST00000362478 107 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.328-201ENST00000365208 113 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 U8.9-201ENST00000365667 134 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 MIR488-201ENST00000365739 83 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RNU6-1336P-201ENST00000383886 109 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RNU2-49P-201ENST00000410666 184 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.622-201ENST00000411091 108 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 MLLT10P1-201ENST00000418346 262 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 AL365496.1-201ENST00000426885 215 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RPS26P45-201ENST00000471748 340 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RN7SKP12-201ENST00000516275 143 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RNU6-781P-201ENST00000516377 101 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 UBL5P2-201ENST00000583788 219 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 AC025754.2-201ENST00000606491 432 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 SNORA67.2-201ENST00000384300 149 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 HMGN2P32-201ENST00000444648 269 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.649-201ENST00000459077 103 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AC090142.3-201ENST00000519012 385 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AC091178.2-201ENST00000584401 117 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AC138915.1-201ENST00000565427 1685 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMCD1Q9NZU5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 U3.8-201ENST00000363675 217 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 RNU6-144P-201ENST00000383951 107 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 SNORA51.10-201ENST00000384418 136 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 SNORA12-201ENST00000391162 147 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 AL139132.1-201ENST00000431587 344 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 AL121890.1-201ENST00000435457 205 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 MIR5688-201ENST00000580619 83 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMCD1Q9NZU5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 RNU4-82P-201ENST00000362443 140 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.120-201ENST00000363304 110 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.124-201ENST00000363339 93 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.281-201ENST00000364774 94 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 RNU6-748P-201ENST00000384648 107 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 SNORD78.1-201ENST00000390866 65 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 U6atac.2-201ENST00000408644 118 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 SNORA36B-201ENST00000410438 131 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC109327.2-201ENST00000448339 378 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AL441985.1-201ENST00000457727 251 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 SNORA70.12-201ENST00000516084 153 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC018630.3-201ENST00000542637 96 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AC022149.2-201ENST00000621061 203 ntBASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMCD1Q9NZU5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RNU1-70P-201ENST00000362618 164 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RNU6-1152P-201ENST00000384576 107 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 MIR147B-201ENST00000390185 80 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 MIR1261-201ENST00000408659 82 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RNA5SP344-201ENST00000411081 104 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 SRIP1-201ENST00000489235 288 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RNU6-237P-201ENST00000515985 71 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 RN7SKP19-201ENST00000516016 252 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 AL138880.2-201ENST00000616214 239 ntBASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
LMCD1Q9NZU5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 RNU6-756P-201ENST00000383997 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms