Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 SNORA8.3-201ENST00000384679 139 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 MIR526A2-201ENST00000390198 65 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 MIR1253-201ENST00000408273 105 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 U8.19-201ENST00000459095 133 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 AP001486.1-201ENST00000463339 476 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 AC018868.1-201ENST00000491307 315 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 AC107393.1-201ENST00000512403 346 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.44□□□□□ -2.02
VSX1Q9NZR4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VSX1Q9NZR4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.7-201ENST00000362352 102 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-103P-201ENST00000363686 107 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNA5SP125-201ENST00000364843 120 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU4-17P-201ENST00000365598 141 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 SNORA26.5-201ENST00000391215 123 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RPS20P10-201ENST00000451209 253 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-991P-201ENST00000516168 107 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 SNORA74D-201ENST00000516404 141 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RNU6-1212P-201ENST00000517023 104 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 AC005972.2-201ENST00000604690 348 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 AC093732.2-201ENST00000607950 274 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.43□□□□□ -2.02
VSX1Q9NZR4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
VSX1Q9NZR4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 RNU6-743P-201ENST00000364151 106 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 RNU6-407P-201ENST00000365280 104 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 MIR592-201ENST00000384959 97 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 SNORA11.1-201ENST00000408133 129 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 COX6CP10-201ENST00000416832 224 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 HSPE1P21-201ENST00000438283 308 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 AL353689.1-201ENST00000438895 199 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 RN7SKP164-201ENST00000516138 266 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 AL033523.1-201ENST00000605153 153 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.42□□□□□ -2.02
VSX1Q9NZR4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
VSX1Q9NZR4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VSX1Q9NZR4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VSX1Q9NZR4 Y_RNA.150-201ENST00000363562 102 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RNU6-682P-201ENST00000363843 106 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RNU6-312P-201ENST00000364629 107 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 MIR626-201ENST00000385032 94 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 MTCO2P33-201ENST00000402100 465 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AL138827.1-201ENST00000402666 306 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RNA5SP21-201ENST00000410917 96 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AL135790.2-201ENST00000437701 267 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AC025750.2-201ENST00000442609 450 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RPS27P22-201ENST00000478056 241 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RPS29P21-201ENST00000496272 170 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RNU7-115P-201ENST00000516433 55 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AC100767.1-201ENST00000528178 123 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AC079600.2-201ENST00000550076 130 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AC026271.5-201ENST00000577873 130 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 AP003357.1-201ENST00000604497 148 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
VSX1Q9NZR4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
VSX1Q9NZR4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VSX1Q9NZR4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VSX1Q9NZR4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VSX1Q9NZR4 RNU6-923P-201ENST00000364753 107 ntBASIC2.4□□□□□ -2.03
VSX1Q9NZR4 RNU6-47P-201ENST00000383866 107 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms