Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNU6-710P-201ENST00000410424 105 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 Z98742.3-201ENST00000418637 326 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.54□□□□□ -2
TDP1Q9NUW8 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 RNU4-71P-201ENST00000516258 113 ntBASIC2.54□□□□□ -2
TDP1Q9NUW8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.54□□□□□ -2
TDP1Q9NUW8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TDP1Q9NUW8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.53□□□□□ -2
TDP1Q9NUW8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
TDP1Q9NUW8 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.82-201ENST00000363000 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.92-201ENST00000363043 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.122-201ENST00000363331 96 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNU6-271P-201ENST00000363858 105 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNY1-201ENST00000364228 113 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.235-201ENST00000364412 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.306-201ENST00000365015 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.312-201ENST00000365089 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.322-201ENST00000365151 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNU6-407P-201ENST00000365280 104 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNU6-907P-201ENST00000390924 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AL135786.1-201ENST00000415892 214 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.650-201ENST00000459002 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.777-201ENST00000516982 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
TDP1Q9NUW8 AC021269.2-201ENST00000532318 330 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AC026271.5-201ENST00000577873 130 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.771-201ENST00000598668 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AC009779.6-201ENST00000603972 165 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.15-201ENST00000611544 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.16-201ENST00000613119 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.12-201ENST00000613778 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.20-201ENST00000613956 192 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.9-201ENST00000615427 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.11-201ENST00000616345 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.2-201ENST00000616535 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.3-201ENST00000617785 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.19-201ENST00000618602 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 RNU2-1-201ENST00000618664 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.6-201ENST00000619225 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.5-201ENST00000619465 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 U2.10-201ENST00000620268 191 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 Y_RNA.789-201ENST00000622480 102 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
TDP1Q9NUW8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2
TDP1Q9NUW8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNU6-1272P-201ENST00000362776 107 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNU1-91P-201ENST00000364746 163 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNU6-160P-201ENST00000384591 107 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.590-201ENST00000410140 107 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNU6-855P-201ENST00000410395 104 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNU1-131P-201ENST00000458943 161 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RPS26P55-201ENST00000471178 356 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 RNA5SP20-201ENST00000515976 84 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.679-201ENST00000516416 91 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
TDP1Q9NUW8 MIR4282-201ENST00000583613 67 ntBASIC2.52□□□□□ -2.01
TDP1Q9NUW8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.52□□□□□ -2.01
TDP1Q9NUW8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TDP1Q9NUW8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.52□□□□□ -2.01
TDP1Q9NUW8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TDP1Q9NUW8 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.51□□□□□ -2.01
TDP1Q9NUW8 SNORD2.1-201ENST00000458762 69 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC011406.1-201ENST00000512440 370 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC136628.3-201ENST00000521868 290 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 MIR3126-201ENST00000577443 74 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC103810.6-201ENST00000606708 136 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC046143.2-201ENST00000609789 160 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 snoU18.1-201ENST00000629629 71 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
TDP1Q9NUW8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TDP1Q9NUW8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
TDP1Q9NUW8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TDP1Q9NUW8 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 RNU6-801P-201ENST00000364087 105 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 RNU6-1164P-201ENST00000364428 107 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 MIR1253-201ENST00000408273 105 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 AL139156.1-201ENST00000412785 841 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 AL356320.1-201ENST00000429616 163 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 AC245102.2-201ENST00000448956 180 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 HSPE1P13-201ENST00000451143 297 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 Y_RNA.637-201ENST00000459424 114 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 RPS27P22-201ENST00000478056 241 ntBASIC2.5□□□□□ -2.01
TDP1Q9NUW8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 503.4 ms