Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.06□□□□□ -2.4
CISHQ9NSE2 RNU6-189P-201ENST00000516120 101 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 RNU6-1291P-201ENST00000516591 104 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 AC023442.1-201ENST00000531247 422 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 AL118558.2-201ENST00000556294 238 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.06□□□□□ -2.4
CISHQ9NSE2 AC087683.1-201ENST00000591187 441 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 MIR7111-201ENST00000619751 72 ntBASIC0.06□□□□□ -2.4
CISHQ9NSE2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
CISHQ9NSE2 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 SNORA20B-201ENST00000384220 132 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 MIR521-1-201ENST00000384902 87 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 MIR573-201ENST00000384964 99 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 RNU6-1304P-201ENST00000411374 106 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AL359672.1-201ENST00000442302 409 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC074133.1-201ENST00000515696 183 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 RNU4-77P-201ENST00000516692 156 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 SNORA74.3-201ENST00000517108 154 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 MIR3684-201ENST00000579779 74 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC120024.3-201ENST00000603167 156 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC104695.3-201ENST00000604052 296 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC010999.1-201ENST00000611856 324 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC091925.1-201ENST00000623204 462 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 AC008133.2-201ENST00000624540 351 ntBASIC0.05□□□□□ -2.4
CISHQ9NSE2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
CISHQ9NSE2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CISHQ9NSE2 Y_RNA.167-201ENST00000363735 109 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 Y_RNA.184-201ENST00000363884 108 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 RNU6-82P-201ENST00000363970 107 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 Y_RNA.319-201ENST00000365138 92 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 RNU6-996P-201ENST00000365438 107 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.04□□□□□ -2.4
CISHQ9NSE2 RNY3P9-201ENST00000384727 106 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 MIR32-201ENST00000384965 70 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 MIR15B-201ENST00000385045 98 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 CALM2P3-201ENST00000400429 449 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 PIGPP3-201ENST00000425307 415 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 MTCO2P16-201ENST00000436962 677 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 HSFY5P-201ENST00000453726 309 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 TPTE2P5-203ENST00000458118 728 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 MTCO1P29-201ENST00000496868 288 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 AC091885.1-201ENST00000506658 268 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.04□□□□□ -2.4
CISHQ9NSE2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.04□□□□□ -2.4
CISHQ9NSE2 MIR3913-1-201ENST00000577744 102 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 AC008536.2-201ENST00000607284 349 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 AC015726.2-201ENST00000620112 122 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 AC078938.1-201ENST00000620993 318 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 AC005609.4-201ENST00000625071 447 ntBASIC0.04□□□□□ -2.4
CISHQ9NSE2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CISHQ9NSE2 MIR1-1-201ENST00000362147 71 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 MIR18A-201ENST00000362310 71 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 RNU6-553P-201ENST00000364047 96 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 RNU4-9P-201ENST00000364951 139 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 RNU6-117P-201ENST00000365415 107 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 MIR520C-201ENST00000385005 87 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 RNU6-159P-201ENST00000391080 106 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 MIR1298-201ENST00000408783 112 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC018865.2-201ENST00000423631 129 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.03□□□□□ -2.4
CISHQ9NSE2 SNRPGP12-201ENST00000449481 213 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 PCNPP5-201ENST00000452246 481 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC114811.1-201ENST00000507207 168 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC093303.1-201ENST00000514549 295 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 RNU6-1038P-201ENST00000516516 104 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC060788.1-201ENST00000521318 469 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.03□□□□□ -2.4
CISHQ9NSE2 UBL5P4-201ENST00000562584 236 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 MIR4764-201ENST00000580680 88 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AL357078.3-201ENST00000607528 618 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AL133215.3-201ENST00000609801 448 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AL121757.2-201ENST00000611223 313 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 FAM157A-202ENST00000615155 405 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 AC009248.2-201ENST00000619826 254 ntBASIC0.03□□□□□ -2.4
CISHQ9NSE2 FGF7P2-201ENST00000332473 296 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 SNORA27.1-201ENST00000362604 124 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU6-280P-201ENST00000364145 104 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 Y_RNA.378-201ENST00000365652 113 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU6-933P-201ENST00000384424 107 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU6-376P-201ENST00000384731 106 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MIR520G-201ENST00000385064 90 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MIR153-2-201ENST00000385225 87 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU6-1158P-201ENST00000391167 107 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 AL590002.1-201ENST00000406554 418 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 AL606923.1-201ENST00000406616 190 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNA5SP95-201ENST00000410319 137 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MTND2P18-201ENST00000419962 1030 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MTCO1P20-201ENST00000425366 358 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 AL358934.1-201ENST00000432346 324 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MTND4LP16-201ENST00000440828 295 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU7-63P-201ENST00000459054 62 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 AC018710.1-201ENST00000506509 158 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 MTND1P22-201ENST00000510572 951 ntBASIC0.02□□□□□ -2.41
CISHQ9NSE2 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms