Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AC084781.2-201ENST00000615568 161 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-454P-201ENST00000364292 107 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 SNORD1A-201ENST00000364968 72 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.356-201ENST00000365475 113 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.529-201ENST00000384586 119 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 MIR559-201ENST00000385188 96 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.605-201ENST00000410577 105 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC096644.2-201ENST00000429278 159 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC245047.3-201ENST00000429428 127 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC027575.1-201ENST00000481064 460 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-408P-201ENST00000515910 100 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.718-201ENST00000517110 102 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AL442163.3-201ENST00000554110 156 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 AC133104.2-201ENST00000615272 193 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 MIR8054-201ENST00000620877 86 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 MIR3674-201ENST00000636576 68 ntBASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
EXOSC3Q9NQT5 WWP1P1-201ENST00000466609 2769 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 ZNF72P-201ENST00000425869 1908 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MIR194-1-201ENST00000384892 85 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 RNA5SP475-201ENST00000410568 110 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC093019.1-201ENST00000443135 252 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 ELOCP24-201ENST00000456370 334 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.632-201ENST00000459189 102 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 RPS26P55-201ENST00000471178 356 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC108210.2-201ENST00000503681 201 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 RNU7-4P-201ENST00000516961 62 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-699P-201ENST00000517081 110 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC093027.1-201ENST00000546698 429 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MIR4303-201ENST00000581299 66 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 AC021506.2-201ENST00000612354 169 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 MIR7843-201ENST00000622274 79 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 U6.115-201ENST00000636045 103 ntBASIC1.25□□□□□ -2.21
EXOSC3Q9NQT5 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU1-22P-201ENST00000363334 158 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-961P-201ENST00000363893 105 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-457P-201ENST00000363999 107 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNY3P14-201ENST00000384309 102 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-440P-201ENST00000390882 105 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-1009P-201ENST00000390996 107 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU1-78P-201ENST00000391248 165 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 MRPL42P3-201ENST00000401492 326 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 MRPL35P1-201ENST00000404272 572 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC018865.2-201ENST00000423631 129 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC097462.1-201ENST00000514125 324 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 RNU7-172P-201ENST00000517125 64 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 MIR2355-201ENST00000517199 87 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC144568.1-201ENST00000520139 137 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC015712.3-201ENST00000559380 164 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 MIR4422-201ENST00000581938 83 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 AC112487.2-201ENST00000637950 304 ntBASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
EXOSC3Q9NQT5 SNORA27.1-201ENST00000362604 124 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.58-201ENST00000362807 102 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-490P-201ENST00000362985 107 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.154-201ENST00000363624 102 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNY3P1-201ENST00000365085 102 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNY3-201ENST00000365484 102 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-708P-201ENST00000384217 107 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 MTND5P20-201ENST00000448677 143 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 CHEK2P4-201ENST00000450340 246 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 RNA5SP20-201ENST00000515976 84 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.702-201ENST00000516843 96 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AC023442.1-201ENST00000531247 422 ntBASIC1.23□□□□□ -2.21
EXOSC3Q9NQT5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms