Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MIR1244-1-201ENST00000612829 85 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MIR1244-3-201ENST00000635744 85 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MIR1244-2-201ENST00000636449 85 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MIR1244-4-202ENST00000636813 85 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MIR378A-201ENST00000362177 66 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 SNORA75.4-201ENST00000391278 119 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 SNX2P2-201ENST00000424553 323 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 AC092423.1-201ENST00000430165 186 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 UQCRBP2-201ENST00000447827 297 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 AC107399.1-201ENST00000451226 265 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 AC010598.1-201ENST00000510378 103 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 MTND4LP26-201ENST00000518144 282 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.93□□□□□ -2.26
HMG20AQ9NP66 CASC19-280ENST00000642102 1351 ntBASIC0.93□□□□□ -2.26
HMG20AQ9NP66 RNU6-1123P-201ENST00000362347 106 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 RNU1-22P-201ENST00000363334 158 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 RNU6-454P-201ENST00000364292 107 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 RNU6-700P-201ENST00000391043 107 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.595-201ENST00000410403 105 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.92□□□□□ -2.26
HMG20AQ9NP66 PDCL2P1-201ENST00000419302 352 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 STAG3L5P-204ENST00000443759 179 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 PGBD4P5-201ENST00000445958 426 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 MIR4778-201ENST00000577635 80 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 MIR3664-201ENST00000579074 99 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.92□□□□□ -2.26
HMG20AQ9NP66 HSPE1P19-201ENST00000603327 295 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AP000942.3-201ENST00000603702 160 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
HMG20AQ9NP66 AC073544.1-201ENST00000600110 1595 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 SNORD33-201ENST00000362761 85 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.72-201ENST00000362894 103 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.160-201ENST00000363677 92 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RNU6-99P-201ENST00000364721 107 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RNU6-407P-201ENST00000365280 104 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RNU6-767P-201ENST00000384132 107 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.482-201ENST00000384377 111 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RNU6-1065P-201ENST00000384513 106 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.619-201ENST00000410951 90 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 FGF7P6-202ENST00000451282 293 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC091021.1-201ENST00000468051 388 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RPL30P7-201ENST00000479312 323 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC097462.1-201ENST00000514125 324 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 RNU7-172P-201ENST00000517125 64 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC018448.1-201ENST00000552843 316 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC004584.2-201ENST00000570407 410 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC080078.2-201ENST00000603766 501 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC104260.1-201ENST00000616660 539 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AC098679.4-201ENST00000624241 654 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 SNORD3E-202ENST00000627253 216 ntBASIC0.91□□□□□ -2.26
HMG20AQ9NP66 AL391987.6-201ENST00000305671 199 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.140-201ENST00000363474 103 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU5F-3P-201ENST00000363767 117 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.248-201ENST00000364501 109 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU6-593P-201ENST00000364716 112 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU6-1264P-201ENST00000383891 107 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU6-505P-201ENST00000384427 107 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.498-201ENST00000384460 102 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU6-136P-201ENST00000384663 107 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC018865.2-201ENST00000423631 129 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 MTCYBP10-201ENST00000424905 650 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 CALM2P4-201ENST00000430810 426 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RPL23AP50-201ENST00000434149 455 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 PCNPP5-201ENST00000452246 481 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 RNU6-165P-201ENST00000517170 99 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC016727.1-205ENST00000605437 569 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 PISRT1.1-201ENST00000616930 107 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC092794.2-201ENST00000620933 563 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 MIR6079-201ENST00000635807 62 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AL669831.3-213ENST00000636676 183 ntBASIC0.9□□□□□ -2.27
HMG20AQ9NP66 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HMG20AQ9NP66 AC005592.1-201ENST00000566527 1640 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNU6-845P-201ENST00000362578 103 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 SNORA27.1-201ENST00000362604 124 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNY3P11-201ENST00000364153 102 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.267-201ENST00000364679 109 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.279-201ENST00000364763 95 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HMG20AQ9NP66 SNORA70.7-201ENST00000384159 133 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms