Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC010205.1-201ENST00000616668 449 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-450P-201ENST00000364654 107 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 AL355796.1-201ENST00000406706 323 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RN7SKP192-201ENST00000411291 327 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RNA5SP508-201ENST00000411327 119 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
BRF2Q9HAW0 MRPS10P1-201ENST00000448483 130 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 UBE2DNL-203ENST00000474922 222 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RPS29P21-201ENST00000496272 170 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RNA5SP20-201ENST00000515976 84 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 RPL21P9-201ENST00000556149 474 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 U6.73-201ENST00000619194 103 ntBASIC1.88□□□□□ -2.11
BRF2Q9HAW0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
BRF2Q9HAW0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
BRF2Q9HAW0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RNU4-76P-201ENST00000364509 141 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 SNORA63.7-201ENST00000365579 123 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RNU6-360P-201ENST00000390944 104 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AL390729.2-201ENST00000416137 156 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AL121890.1-201ENST00000435457 205 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AC005002.2-201ENST00000438228 269 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 RPEP5-201ENST00000441137 268 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
BRF2Q9HAW0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
BRF2Q9HAW0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BRF2Q9HAW0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
BRF2Q9HAW0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
BRF2Q9HAW0 SNORA27.1-201ENST00000362604 124 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU6-1227P-201ENST00000383981 107 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 MIR873-201ENST00000401120 77 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU2-54P-201ENST00000410299 190 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU7-94P-201ENST00000459576 63 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RPL23AP63-201ENST00000498752 471 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.86□□□□□ -2.11
BRF2Q9HAW0 SNORA70.12-201ENST00000516084 153 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU6-397P-201ENST00000516226 104 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU7-110P-201ENST00000516891 62 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU7-172P-201ENST00000517125 64 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 RNU2-12P-201ENST00000517216 168 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.86□□□□□ -2.11
BRF2Q9HAW0 AC104695.3-201ENST00000604052 296 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 AC011373.1-201ENST00000607270 237 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 AC022140.2-201ENST00000623500 188 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
BRF2Q9HAW0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AL356292.1-201ENST00000283110 373 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.158-201ENST00000363651 101 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU6-439P-201ENST00000384188 106 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU6-21P-201ENST00000384710 107 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU6-376P-201ENST00000384731 106 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU6-823P-201ENST00000391042 103 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.645-201ENST00000391229 102 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RPL23AP36-201ENST00000413895 458 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AC073910.1-201ENST00000445047 438 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AC005042.3-201ENST00000453230 174 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RPS26P45-201ENST00000471748 340 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNU7-99P-201ENST00000516271 62 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 RNA5SP437-201ENST00000517249 129 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 MIR8074-201ENST00000615081 81 ntBASIC1.85□□□□□ -2.11
BRF2Q9HAW0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
BRF2Q9HAW0 RNU6-639P-201ENST00000384074 107 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms