Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AF235103.2-201ENST00000525753 346 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 MIR5701-3-201ENST00000578890 82 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 MIR5701-1-201ENST00000585138 82 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 AL021879.1-201ENST00000611756 288 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 AC040896.1-201ENST00000613819 479 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 MIR5701-2-201ENST00000615634 82 ntBASIC1.25□□□□□ -2.21
RPAP3Q9H6T3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RNU6-440P-201ENST00000390882 105 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RPS3AP52-201ENST00000435639 297 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RPS27P22-201ENST00000478056 241 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RPL7P42-201ENST00000481005 679 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 AC010469.2-201ENST00000496412 480 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 RNU7-99P-201ENST00000516271 62 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 APOOP3-201ENST00000536787 586 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 AL390123.1-201ENST00000603216 237 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 AC005014.2-201ENST00000607795 599 ntBASIC1.24□□□□□ -2.21
RPAP3Q9H6T3 AC018630.2-201ENST00000534866 2403 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 RNU6-874P-201ENST00000362390 105 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 MIR548K-201ENST00000408406 116 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 RN7SKP200-201ENST00000410564 320 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 MTND3P8-201ENST00000412909 339 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 SNX2P2-201ENST00000424553 323 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 U8.22-201ENST00000459141 133 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 RNU6-1016P-201ENST00000516689 94 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AL121579.1-201ENST00000555129 305 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AC004584.2-201ENST00000570407 410 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 MIR4438-201ENST00000585271 93 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AC125232.2-201ENST00000592457 143 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 HSPE1P19-201ENST00000603327 295 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AL357075.2-201ENST00000614906 189 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AC106754.2-201ENST00000623006 233 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 AC068137.4-201ENST00000638485 296 ntBASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
RPAP3Q9H6T3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 RNA5SP361-201ENST00000362686 118 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC090617.3-201ENST00000573670 475 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC068790.6-201ENST00000602558 258 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC009229.3-201ENST00000608056 282 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.22□□□□□ -2.21
RPAP3Q9H6T3 RNU6-593P-201ENST00000364716 112 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 MIR190B-201ENST00000401119 79 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 MRPL42P3-201ENST00000401492 326 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 MIR548J-201ENST00000408833 112 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 AC074085.1-201ENST00000413598 418 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 EIF1P2-201ENST00000428233 350 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 MTND3P10-201ENST00000450967 341 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 MIR6788-201ENST00000618842 66 ntBASIC1.21□□□□□ -2.22
RPAP3Q9H6T3 RNY1P16-201ENST00000363063 111 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 RNU6-879P-201ENST00000364328 108 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.404-201ENST00000383978 102 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.557-201ENST00000384680 107 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 MIR329-1-201ENST00000385028 80 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 RNU6-700P-201ENST00000391043 107 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AL355796.1-201ENST00000406706 323 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 MTND1P4-201ENST00000435196 415 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 MRPS10P1-201ENST00000448483 130 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AC018710.1-201ENST00000506509 158 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AC046134.1-201ENST00000514454 666 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 RNU6-1213P-201ENST00000517075 94 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AC105029.1-201ENST00000520250 669 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 MIR151B-201ENST00000584249 96 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AC006435.5-201ENST00000624486 112 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.358-201ENST00000365491 99 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 Y_RNA.364-201ENST00000365532 101 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 SNORA20B-201ENST00000384220 132 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 RNU6-601P-201ENST00000384540 107 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 FCF1P9-201ENST00000412546 282 ntBASIC1.19□□□□□ -2.22
RPAP3Q9H6T3 ELOCP21-201ENST00000412558 336 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms