Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUCKS1Q9H1E3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RN7SKP111-201ENST00000410349 271 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RNA5SP293-201ENST00000410527 113 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 HMGN2P31-201ENST00000432430 273 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 AC018634.1-201ENST00000437554 401 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RPL36AP48-201ENST00000485521 314 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RNA5SP385-201ENST00000515947 110 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-109P-201ENST00000516364 107 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-184P-201ENST00000516514 107 ntBASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUCKS1Q9H1E3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 Y_RNA.220-201ENST00000364244 109 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-1292P-201ENST00000383856 107 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 MIR449B-201ENST00000384995 97 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 MIR590-201ENST00000385008 97 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-592P-201ENST00000411333 103 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 DBIP2-201ENST00000419076 262 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RPL30P4-201ENST00000429309 333 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 AC009969.1-201ENST00000438726 172 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RNU7-23P-201ENST00000459465 62 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RPS27P22-201ENST00000478056 241 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 AC093663.1-201ENST00000497190 394 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 RNU6-504P-201ENST00000516568 104 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 MIR2276-201ENST00000516886 89 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 MIR3117-201ENST00000584034 78 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 MIR4506-201ENST00000584693 77 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 AC073476.4-201ENST00000628409 72 ntBASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.73□□□□□ -1.81
NUCKS1Q9H1E3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 HMGN2P16-201ENST00000456802 261 ntBASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 HMGN1P18-201ENST00000457642 277 ntBASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 Y_RNA.685-201ENST00000516532 108 ntBASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.72□□□□□ -1.81
NUCKS1Q9H1E3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.71□□□□□ -1.81
NUCKS1Q9H1E3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
NUCKS1Q9H1E3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-198P-201ENST00000384258 104 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 MIR29B2-201ENST00000385055 81 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 AC016909.1-201ENST00000415916 166 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 AC010099.1-201ENST00000455434 375 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 AC096725.1-201ENST00000514266 313 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 RN7SKP282-201ENST00000516824 299 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 AC011604.1-201ENST00000545978 196 ntBASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUCKS1Q9H1E3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 RNA5SP383-201ENST00000362934 120 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 RNU1-22P-201ENST00000363334 158 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 SNORA19.1-201ENST00000410656 129 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 EIF4EP4-201ENST00000424916 578 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 CYCSP4-201ENST00000429682 331 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 AC011406.1-201ENST00000512440 370 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 AP000867.2-201ENST00000532468 320 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 AC008739.2-201ENST00000597006 317 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 MIR6076-201ENST00000617521 113 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 U6.73-201ENST00000619194 103 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 MIR6075-201ENST00000620782 95 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 U4.6-201ENST00000621618 127 ntBASIC3.7□□□□□ -1.82
NUCKS1Q9H1E3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 RNA5SP119-201ENST00000362715 117 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 MIR450A2-201ENST00000385022 100 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 MIR181B1-201ENST00000385240 110 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 MIR1294-201ENST00000408503 142 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 RPL30P14-201ENST00000482744 348 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 RPL32P34-201ENST00000486380 400 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 AC097462.1-201ENST00000514125 324 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 SNORA31.26-201ENST00000517250 137 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 AC109329.2-201ENST00000519658 482 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms