Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CCDC113Q9H0I3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 SNORD58.1-201ENST00000391313 66 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 OOSP1P1-201ENST00000423265 274 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 AL353689.1-201ENST00000438895 199 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 RNA5SP137-201ENST00000516833 135 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.9□□□□□ -1.95
CCDC113Q9H0I3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 AL356292.1-201ENST00000283110 373 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 MIR518C-201ENST00000384822 101 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 SNORA40.19-201ENST00000390846 128 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 RNU6-651P-201ENST00000411040 105 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 RNU7-172P-201ENST00000517125 64 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 AL442067.1-201ENST00000613261 223 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 AC073349.3-201ENST00000617616 186 ntBASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC113Q9H0I3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNU4-13P-201ENST00000364019 141 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNU6-763P-201ENST00000390865 106 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNA5SP270-201ENST00000411361 118 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 AC096725.1-201ENST00000514266 313 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.88□□□□□ -1.95
CCDC113Q9H0I3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 AC134026.1-201ENST00000623249 2239 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNU1-58P-201ENST00000362413 163 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.199-201ENST00000364014 102 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNU6-801P-201ENST00000364087 105 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNU6-211P-201ENST00000384047 107 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNU6-376P-201ENST00000384731 106 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNA5SP323-201ENST00000391094 133 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RNU11-3P-201ENST00000391111 133 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 MTCO2P33-201ENST00000402100 465 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 RPS20P10-201ENST00000451209 253 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 YWHAEP4-201ENST00000505390 198 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 AC009779.6-201ENST00000603972 165 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 U6.73-201ENST00000619194 103 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 MIR338-201ENST00000636369 67 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 AC068647.2-201ENST00000637380 353 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 AL136360.1-201ENST00000503377 1900 ntBASIC2.87□□□□□ -1.95
CCDC113Q9H0I3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AL365361.1-201ENST00000566942 3481 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 RNU6-136P-201ENST00000384663 107 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 RNU11-5P-201ENST00000391216 129 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 MIR1298-201ENST00000408783 112 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 SUMO1P4-201ENST00000429430 302 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 RPS15AP28-201ENST00000435088 386 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 RNU6-63P-201ENST00000516690 95 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AP005660.1-201ENST00000522972 293 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 MIR4282-201ENST00000583613 67 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AC007229.1-201ENST00000590455 412 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 AL078604.3-201ENST00000615580 211 ntBASIC2.86□□□□□ -1.95
CCDC113Q9H0I3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms