Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SUMO2P15-201ENST00000604285 278 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AL137849.1-201ENST00000604767 169 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 SNORA28-201ENST00000606769 126 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 MIR6737-201ENST00000617385 70 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AC027279.3-201ENST00000625055 122 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 MIR1910-201ENST00000636955 80 ntBASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.02□□□□□ -2.25
LCE3DQ9BYE3 AL356274.2-201ENST00000624379 3752 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 MTND5P18-201ENST00000445624 1801 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AL035425.3-201ENST00000564206 4996 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNA5SP507-201ENST00000363603 121 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORD115-28-201ENST00000363931 81 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORD14E-201ENST00000364009 85 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORD114-6-201ENST00000364393 72 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-147P-201ENST00000383983 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORA70F-201ENST00000384142 135 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-443P-201ENST00000384780 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 MIR802-201ENST00000390235 94 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 SNORA12.1-201ENST00000390873 148 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RPL21P3-201ENST00000395517 478 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 MIR1262-201ENST00000408276 93 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC007064.1-201ENST00000412238 351 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 CYCSP49-201ENST00000420810 319 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC092427.1-202ENST00000430569 476 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AL445687.1-201ENST00000439946 251 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC233266.1-201ENST00000454518 96 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 snoU13.22-201ENST00000459428 104 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC010401.1-201ENST00000463867 348 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AL049873.1-201ENST00000480540 376 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC099522.1-202ENST00000514718 367 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-693P-201ENST00000516134 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNA5SP164-201ENST00000516533 110 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNA5SP137-201ENST00000516833 135 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 IGLV2-28-201ENST00000520681 304 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 IGKV1-22-201ENST00000524313 326 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 CYCSP29-201ENST00000533731 318 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC108081.1-201ENST00000604358 221 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC069114.2-201ENST00000604699 304 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC242852.1-201ENST00000612151 96 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 MIR6861-201ENST00000618657 64 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 AC244015.1-201ENST00000622301 99 ntBASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
LCE3DQ9BYE3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LCE3DQ9BYE3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-23P-201ENST00000363283 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 SNORA33-201ENST00000363664 130 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNA5SP493-201ENST00000364115 91 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-268P-201ENST00000364174 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-1019P-201ENST00000364424 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 SNORA73.2-201ENST00000364946 201 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-32P-201ENST00000383948 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 Y_RNA.454-201ENST00000384224 113 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-13P-201ENST00000384248 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-12P-201ENST00000384604 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-41P-201ENST00000384741 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 MIR621-201ENST00000384919 96 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 AL627390.1-201ENST00000396055 340 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 AC245047.3-201ENST00000429428 127 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1□□□□□ -2.25
LCE3DQ9BYE3 RN7SL329P-201ENST00000467740 299 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RN7SL604P-201ENST00000492589 296 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU2-27P-201ENST00000516185 142 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU6-830P-201ENST00000516353 107 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1□□□□□ -2.25
LCE3DQ9BYE3 RNA5SP170-201ENST00000517150 101 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms