Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNA5SP511-201ENST00000410487 115 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RPS27P22-201ENST00000478056 241 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 YWHAEP4-201ENST00000505390 198 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 Y_RNA.712-201ENST00000517011 92 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP490-201ENST00000517141 136 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 AC023043.3-201ENST00000593113 385 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-117P-201ENST00000365415 107 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 MIR1289-1-201ENST00000408836 144 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 RN7SKP111-201ENST00000410349 271 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 RNU7-107P-201ENST00000459121 61 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 FCF1P8-201ENST00000510322 597 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 AL049861.1-201ENST00000603130 150 ntBASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM56Q9BRZ2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 SNORD56.3-201ENST00000363507 71 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNY1P11-201ENST00000363759 113 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-484P-201ENST00000384016 107 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-476P-201ENST00000384726 107 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 Z92545.1-201ENST00000411782 234 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 HMGN2P18-201ENST00000450680 270 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 AC090515.1-201ENST00000465295 476 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP153-201ENST00000516498 76 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 Y_RNA.692-201ENST00000516627 105 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-126P-201ENST00000516685 103 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 AC090115.4-201ENST00000609970 188 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 AL449363.1-201ENST00000617815 186 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 MIR1248-201ENST00000629190 106 ntBASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM56Q9BRZ2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
TRIM56Q9BRZ2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM56Q9BRZ2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-418P-201ENST00000384035 107 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 MIR561-201ENST00000385216 97 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 SNORA26-201ENST00000391286 122 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 RNU2-70P-201ENST00000410718 179 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
TRIM56Q9BRZ2 Y_RNA.120-201ENST00000363304 110 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-978P-201ENST00000364371 103 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 Y_RNA.332-201ENST00000365271 113 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 AC123900.1-201ENST00000420390 96 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 RPS29P21-201ENST00000496272 170 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 AC093259.1-201ENST00000509755 300 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 uc_338.4-201ENST00000616635 176 ntBASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM56Q9BRZ2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 RNU1-22P-201ENST00000363334 158 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-1144P-201ENST00000384247 104 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 AC016909.1-201ENST00000415916 166 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 CYCSP49-201ENST00000420810 319 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 AC003685.2-201ENST00000422795 395 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 BX510359.1-201ENST00000456973 237 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 AC097462.1-201ENST00000514125 324 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 SNORA4.4-201ENST00000515921 135 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 SNORD77.4-201ENST00000516158 81 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 RPL23AP91-201ENST00000569211 455 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 MIR4438-201ENST00000585271 93 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 U6.95-201ENST00000636931 70 ntBASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms