Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 MTND2P23-201ENST00000422990 651 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AC139712.2-201ENST00000424302 339 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 FCF1P4-201ENST00000448326 183 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 RNU6-107P-201ENST00000516643 102 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 CYCSP23-201ENST00000519781 313 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AL121655.1-201ENST00000605811 308 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 BX248123.2-201ENST00000606318 124 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 AL078596.1-201ENST00000624856 447 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
RTP3Q9BQQ7 RNU6-961P-201ENST00000363893 105 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 MIR548B-201ENST00000385247 97 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 SDAD1P3-201ENST00000427380 333 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AC016717.1-201ENST00000448918 286 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AC067942.3-201ENST00000512025 362 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AC074133.1-201ENST00000515696 183 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.720-201ENST00000517166 92 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AC018448.1-201ENST00000552843 316 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 AL021879.1-201ENST00000611756 288 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 PART1_1.1-201ENST00000611761 217 ntBASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.145-201ENST00000363527 102 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.153-201ENST00000363615 91 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.380-201ENST00000365663 111 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RNU6-160P-201ENST00000384591 107 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RPEP5-201ENST00000441137 268 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 NDUFB4P10-201ENST00000452541 359 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RNU7-57P-201ENST00000459540 60 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RPL26P26-201ENST00000480251 434 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RNU6-397P-201ENST00000516226 104 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RNU6-948P-201ENST00000516374 107 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.772-201ENST00000606692 102 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 AC010205.1-201ENST00000616668 449 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.89□□□□□ -2.11
RTP3Q9BQQ7 RNU6-626P-201ENST00000363354 107 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 SNORA63.7-201ENST00000365579 123 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.459-201ENST00000384251 102 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 MRPL35P1-201ENST00000404272 572 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 MIR1283-2-201ENST00000408621 87 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 RNU6-130P-201ENST00000411112 103 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AL357134.1-201ENST00000445848 426 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 RNU1-131P-201ENST00000458943 161 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 RNU6-625P-201ENST00000459412 107 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AC114982.1-201ENST00000469402 321 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AC131281.1-201ENST00000522984 164 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 RAC1P9-201ENST00000604990 392 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 AL590240.4-201ENST00000616908 390 ntBASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RTP3Q9BQQ7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU1-58P-201ENST00000362413 163 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.143-201ENST00000363520 106 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.210-201ENST00000364161 110 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU6-20P-201ENST00000384106 107 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 MTND5P22-201ENST00000458380 195 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU6-498P-201ENST00000459468 107 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 MTATP8P1-201ENST00000467115 207 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU6-1045P-201ENST00000516321 107 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RNU6-897P-201ENST00000517135 105 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 AL355297.3-201ENST00000604082 446 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms