Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 Y_RNA.557-201ENST00000384680 107 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 MRPL42P3-201ENST00000401492 326 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.17□□□□□ -2.22
CITED1Q99966 RPS27P1-201ENST00000450552 247 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.17□□□□□ -2.22
CITED1Q99966 AC010598.1-201ENST00000510378 103 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC022868.1-201ENST00000517767 391 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 SUMO2P16-201ENST00000519475 264 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC105029.1-201ENST00000520250 669 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.17□□□□□ -2.22
CITED1Q99966 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.17□□□□□ -2.22
CITED1Q99966 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.17□□□□□ -2.22
CITED1Q99966 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.17□□□□□ -2.22
CITED1Q99966 MIR4452-201ENST00000583004 71 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC092794.1-201ENST00000612734 582 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC092794.2-201ENST00000620933 563 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 AC099654.5-201ENST00000636479 350 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.17□□□□□ -2.22
CITED1Q99966 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 Y_RNA.358-201ENST00000365491 99 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 Y_RNA.404-201ENST00000383978 102 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 RNU6-1031P-201ENST00000384773 107 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 MIR329-1-201ENST00000385028 80 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 RNU11-5P-201ENST00000391216 129 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 SNORA75.4-201ENST00000391278 119 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 RNU6-876P-201ENST00000391295 104 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 MTCYBP4-201ENST00000401524 249 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 Y_RNA.619-201ENST00000410951 90 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.16□□□□□ -2.22
CITED1Q99966 MRPS10P1-201ENST00000448483 130 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 FGF7P6-202ENST00000451282 293 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 SNORA31.10-201ENST00000516482 106 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.16□□□□□ -2.22
CITED1Q99966 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.16□□□□□ -2.22
CITED1Q99966 AC004584.2-201ENST00000570407 410 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AC125232.2-201ENST00000592457 143 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AL021879.1-201ENST00000611756 288 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AC104260.1-201ENST00000616660 539 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 AC006435.5-201ENST00000624486 112 ntBASIC1.16□□□□□ -2.22
CITED1Q99966 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CITED1Q99966 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
CITED1Q99966 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 RNU6-1264P-201ENST00000383891 107 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 RNU6-1145P-201ENST00000384246 107 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 AL034345.1-201ENST00000407768 123 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 AL354695.1-201ENST00000427935 228 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.15□□□□□ -2.23
CITED1Q99966 PCNPP5-201ENST00000452246 481 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.15□□□□□ -2.23
CITED1Q99966 SCARNA16.2-201ENST00000516520 172 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 RNU7-128P-201ENST00000517247 62 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 RPL21P9-201ENST00000556149 474 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 AL365434.2-201ENST00000607979 234 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
CITED1Q99966 AC073544.1-201ENST00000600110 1595 ntBASIC1.15□□□□□ -2.23
CITED1Q99966 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CITED1Q99966 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
CITED1Q99966 AC018630.2-201ENST00000534866 2403 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 RNU6-845P-201ENST00000362578 103 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 RNA5SP361-201ENST00000362686 118 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 SNORA20B-201ENST00000384220 132 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 RNA5SP475-201ENST00000410568 110 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 PGBD4P5-201ENST00000445958 426 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 RPL17P19-201ENST00000489069 552 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.14□□□□□ -2.23
CITED1Q99966 AC116353.2-201ENST00000505332 712 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 AC074133.1-201ENST00000515696 183 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.14□□□□□ -2.23
CITED1Q99966 MIR3684-201ENST00000579779 74 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.14□□□□□ -2.23
CITED1Q99966 MIR1244-1-201ENST00000612829 85 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 MIR7974-201ENST00000615835 79 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 MIR1244-3-201ENST00000635744 85 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 MIR1244-2-201ENST00000636449 85 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 MIR1244-4-202ENST00000636813 85 ntBASIC1.14□□□□□ -2.23
CITED1Q99966 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CITED1Q99966 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CITED1Q99966 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CITED1Q99966 RNU6-874P-201ENST00000362390 105 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 Y_RNA.248-201ENST00000364501 109 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 RNU6-407P-201ENST00000365280 104 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 ELOCP21-201ENST00000412558 336 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.13□□□□□ -2.23
CITED1Q99966 AC114482.1-201ENST00000418010 247 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 Y_RNA.635-201ENST00000459041 101 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 MIR2053-201ENST00000459295 91 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 RNU7-172P-201ENST00000517125 64 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 AC018448.1-201ENST00000552843 316 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 AL162424.1-201ENST00000602325 221 ntBASIC1.13□□□□□ -2.23
CITED1Q99966 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms