Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 RN7SKP101-201ENST00000411376 320 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.66□□□□□ -2.14
CDCA3Q99618 SNORA40.9-201ENST00000515895 93 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.66□□□□□ -2.14
CDCA3Q99618 AL442163.3-201ENST00000554110 156 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 MIR4421-201ENST00000578133 69 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 AC092447.9-201ENST00000603395 144 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 AL080274.1-201ENST00000605565 220 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 AL050343.2-201ENST00000607338 280 ntBASIC1.66□□□□□ -2.14
CDCA3Q99618 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.66□□□□□ -2.14
CDCA3Q99618 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
CDCA3Q99618 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CDCA3Q99618 MIR369-201ENST00000362155 70 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 Y_RNA.61-201ENST00000362835 102 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNU6-708P-201ENST00000384217 107 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 MIR628-201ENST00000385229 95 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNA5SP475-201ENST00000410568 110 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.65□□□□□ -2.15
CDCA3Q99618 RNU6-625P-201ENST00000459412 107 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 AC010409.1-201ENST00000487382 476 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNU6-408P-201ENST00000515910 100 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNU6-1170P-201ENST00000515974 106 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 RNU1-92P-201ENST00000517017 135 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.65□□□□□ -2.15
CDCA3Q99618 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.65□□□□□ -2.15
CDCA3Q99618 AC084364.2-201ENST00000546924 395 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.65□□□□□ -2.15
CDCA3Q99618 AC006600.1-201ENST00000572529 153 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 AL353149.1-201ENST00000610667 244 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.65□□□□□ -2.15
CDCA3Q99618 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CDCA3Q99618 RNU6-1266P-201ENST00000362794 105 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 RNU6-112P-201ENST00000363599 104 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 SNORA33-201ENST00000363664 130 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 Y_RNA.252-201ENST00000364556 101 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 Y_RNA.813-201ENST00000364639 102 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 Y_RNA.431-201ENST00000384086 102 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.64□□□□□ -2.15
CDCA3Q99618 CST2P1-201ENST00000425770 87 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 TOMM22P2-201ENST00000430735 237 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 SNORD65B-201ENST00000459126 73 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
CDCA3Q99618 RNU6-976P-201ENST00000516086 111 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 AC027419.1-201ENST00000522976 328 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.64□□□□□ -2.15
CDCA3Q99618 AC069114.2-201ENST00000604699 304 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 AC091925.1-201ENST00000623204 462 ntBASIC1.64□□□□□ -2.15
CDCA3Q99618 Y_RNA.80-201ENST00000362996 102 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 RNU6-1019P-201ENST00000364424 107 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 RNU6-1264P-201ENST00000383891 107 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 Y_RNA.485-201ENST00000384395 102 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 RNY3P4-201ENST00000384428 101 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC009310.1-201ENST00000414414 451 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.63□□□□□ -2.15
CDCA3Q99618 RAB28P5-201ENST00000427490 651 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.63□□□□□ -2.15
CDCA3Q99618 RNU6-911P-201ENST00000516523 104 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 SNORA31.17-201ENST00000516953 127 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 VN1R91P-201ENST00000594377 169 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC010900.2-201ENST00000604508 210 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC006157.1-201ENST00000611750 366 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 MIR4272-201ENST00000635924 64 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.63□□□□□ -2.15
CDCA3Q99618 AC010615.1-201ENST00000594254 1764 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 RNU6-961P-201ENST00000363893 105 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 Y_RNA.466-201ENST00000384294 113 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AC018865.2-201ENST00000423631 129 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AC245047.4-201ENST00000433189 144 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDCA3Q99618 RNU4-77P-201ENST00000516692 156 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDCA3Q99618 AP002001.1-203ENST00000534002 267 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AL157834.3-201ENST00000615543 103 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AC011476.5-201ENST00000615594 130 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AC090971.5-201ENST00000621102 293 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 uc_338.22-201ENST00000622722 187 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 AC090574.1-201ENST00000623186 233 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 MIR3674-201ENST00000636576 68 ntBASIC1.62□□□□□ -2.15
CDCA3Q99618 MTND4P29-201ENST00000503122 1372 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 Y_RNA.39-201ENST00000362620 98 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 RNU6-797P-201ENST00000363101 109 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 RNU6-296P-201ENST00000384608 107 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 RNA5SP323-201ENST00000391094 133 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 RNU6-1186P-201ENST00000410429 97 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 RNU2-7P-201ENST00000410794 178 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.61□□□□□ -2.15
CDCA3Q99618 FCF1P4-201ENST00000448326 183 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.61□□□□□ -2.15
CDCA3Q99618 HMGN1P7-201ENST00000491722 313 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
CDCA3Q99618 SNORA4-201ENST00000584302 138 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms