Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.4□□□□□ -2.35
VAT1Q99536 POLR3GP2-201ENST00000588366 668 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 AC007014.2-201ENST00000615581 479 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 7SK.10-201ENST00000621414 298 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 AC244015.1-201ENST00000622301 99 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 AC099654.12-201ENST00000639868 649 ntBASIC0.4□□□□□ -2.35
VAT1Q99536 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
VAT1Q99536 Y_RNA.224-201ENST00000364308 111 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RNU6-1322P-201ENST00000364309 107 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 Y_RNA.336-201ENST00000365307 109 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 Y_RNA.409-201ENST00000383990 98 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 MIR891A-201ENST00000401237 79 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RNU6-648P-201ENST00000410190 107 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AC092423.1-201ENST00000430165 186 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AC093019.1-201ENST00000443135 252 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.39□□□□□ -2.35
VAT1Q99536 AC018710.1-201ENST00000506509 158 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RN7SKP298-201ENST00000515950 94 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RNA5SP20-201ENST00000515976 84 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 RNU6-835P-201ENST00000516974 104 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AC010999.1-201ENST00000611856 324 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AC097520.1-201ENST00000624435 385 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 AL008636.1-201ENST00000625038 1018 ntBASIC0.39□□□□□ -2.35
VAT1Q99536 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.39□□□□□ -2.35
VAT1Q99536 AC027514.1-201ENST00000588561 1603 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 MIR103A2-201ENST00000362154 78 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.38□□□□□ -2.35
VAT1Q99536 RNU6-163P-201ENST00000384396 106 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 RNU6-95P-201ENST00000384697 107 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 RNU6-376P-201ENST00000384731 106 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 RNU5A-5P-201ENST00000411054 116 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 ZNF885P-201ENST00000420174 1098 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 AC018865.2-201ENST00000423631 129 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.38□□□□□ -2.35
VAT1Q99536 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.38□□□□□ -2.35
VAT1Q99536 MTCO1P19-201ENST00000443487 500 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.38□□□□□ -2.35
VAT1Q99536 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 RNU6-1110P-201ENST00000516462 101 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 MTND4LP26-201ENST00000518144 282 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.38□□□□□ -2.35
VAT1Q99536 RNU6-89P-201ENST00000606519 100 ntBASIC0.38□□□□□ -2.35
VAT1Q99536 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
VAT1Q99536 Y_RNA.231-201ENST00000364358 102 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 RNU6-407P-201ENST00000365280 104 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 MIR1185-1-201ENST00000408598 86 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AL590632.1-201ENST00000424289 371 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.37□□□□□ -2.35
VAT1Q99536 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 RNU6-956P-201ENST00000458868 103 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 Y_RNA.676-201ENST00000516393 96 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.37□□□□□ -2.35
VAT1Q99536 AC134698.4-201ENST00000523451 826 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 Z69908.1-201ENST00000622603 247 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
VAT1Q99536 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
VAT1Q99536 SNORA27.1-201ENST00000362604 124 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 SNORA25.3-201ENST00000363205 127 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 Y_RNA.372-201ENST00000365599 102 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 MIR517A-201ENST00000385001 87 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 RNU1-119P-201ENST00000391122 165 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 AC244098.3-201ENST00000424803 96 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 MTCYBP10-201ENST00000424905 650 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 NDUFA5P4-201ENST00000436704 385 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 DAP3P1-201ENST00000441522 278 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 RNU6-496P-201ENST00000516145 99 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 Y_RNA.683-201ENST00000516508 93 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 MIR5696-201ENST00000578474 85 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
VAT1Q99536 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VAT1Q99536 RNU6-281P-201ENST00000384212 103 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 MTCYBP4-201ENST00000401524 249 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AL137792.2-201ENST00000443484 235 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 CYCTP-201ENST00000504253 315 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 ACA59.1-201ENST00000515966 143 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AL358944.1-201ENST00000528537 144 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 LRRC34P1-201ENST00000542742 915 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AC011195.1-201ENST00000578177 177 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AC120024.3-201ENST00000603167 156 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AL078603.1-201ENST00000603824 313 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 AC027279.3-201ENST00000625055 122 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.35□□□□□ -2.35
VAT1Q99536 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
VAT1Q99536 Y_RNA.481-201ENST00000384373 102 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 RNU6-1067P-201ENST00000384752 107 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 Y_RNA.582-201ENST00000391023 95 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 PIGPP3-201ENST00000425307 415 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AC092447.3-201ENST00000426027 686 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 ERLEC1P1-201ENST00000433806 578 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms