Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PNKPQ96T60 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PNKPQ96T60 Y_RNA.270-201ENST00000364693 104 ntBASIC2.58□□□□□ -2
PNKPQ96T60 Y_RNA.308-201ENST00000365043 101 ntBASIC2.58□□□□□ -2
PNKPQ96T60 RNU6-763P-201ENST00000390865 106 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AL355796.1-201ENST00000406706 323 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
PNKPQ96T60 CYP2C59P-201ENST00000457790 269 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AC114982.1-201ENST00000469402 321 ntBASIC2.58□□□□□ -2
PNKPQ96T60 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.58□□□□□ -2
PNKPQ96T60 RNU1-41P-201ENST00000516161 162 ntBASIC2.58□□□□□ -2
PNKPQ96T60 RNU1-48P-201ENST00000516400 162 ntBASIC2.58□□□□□ -2
PNKPQ96T60 RNA5SP490-201ENST00000517141 136 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.58□□□□□ -2
PNKPQ96T60 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
PNKPQ96T60 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.58□□□□□ -2
PNKPQ96T60 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
PNKPQ96T60 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
PNKPQ96T60 MIR3117-201ENST00000584034 78 ntBASIC2.58□□□□□ -2
PNKPQ96T60 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.58□□□□□ -2
PNKPQ96T60 MIR6715A-201ENST00000615929 79 ntBASIC2.58□□□□□ -2
PNKPQ96T60 AL365265.1-201ENST00000621045 234 ntBASIC2.58□□□□□ -2
PNKPQ96T60 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
PNKPQ96T60 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.58□□□□□ -2
PNKPQ96T60 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PNKPQ96T60 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PNKPQ96T60 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.57□□□□□ -2
PNKPQ96T60 RNA5SP289-201ENST00000362332 137 ntBASIC2.57□□□□□ -2
PNKPQ96T60 Y_RNA.124-201ENST00000363339 93 ntBASIC2.57□□□□□ -2
PNKPQ96T60 RNU6-1048P-201ENST00000364054 107 ntBASIC2.57□□□□□ -2
PNKPQ96T60 Y_RNA.361-201ENST00000365515 120 ntBASIC2.57□□□□□ -2
PNKPQ96T60 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
PNKPQ96T60 RNU4-70P-201ENST00000384579 139 ntBASIC2.57□□□□□ -2
PNKPQ96T60 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
PNKPQ96T60 SNORA26.5-201ENST00000391215 123 ntBASIC2.57□□□□□ -2
PNKPQ96T60 COX6CP10-201ENST00000416832 224 ntBASIC2.57□□□□□ -2
PNKPQ96T60 AC074290.1-201ENST00000448883 135 ntBASIC2.57□□□□□ -2
PNKPQ96T60 RNU7-120P-201ENST00000459334 63 ntBASIC2.57□□□□□ -2
PNKPQ96T60 RNU6-221P-201ENST00000459541 99 ntBASIC2.57□□□□□ -2
PNKPQ96T60 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.57□□□□□ -2
PNKPQ96T60 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.57□□□□□ -2
PNKPQ96T60 AC090616.3-201ENST00000582184 217 ntBASIC2.57□□□□□ -2
PNKPQ96T60 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
PNKPQ96T60 AL355297.2-201ENST00000604792 129 ntBASIC2.57□□□□□ -2
PNKPQ96T60 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.57□□□□□ -2
PNKPQ96T60 AC134026.1-201ENST00000623249 2239 ntBASIC2.56□□□□□ -2
PNKPQ96T60 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-1020P-201ENST00000363684 107 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNA5SP456-201ENST00000364002 114 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
PNKPQ96T60 SNORA20B-201ENST00000384220 132 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-886P-201ENST00000384319 105 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-493P-201ENST00000391321 108 ntBASIC2.56□□□□□ -2
PNKPQ96T60 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-855P-201ENST00000410395 104 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-710P-201ENST00000410424 105 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU2-48P-201ENST00000410694 191 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU2-63P-201ENST00000410792 194 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
PNKPQ96T60 AL121890.1-201ENST00000435457 205 ntBASIC2.56□□□□□ -2
PNKPQ96T60 SUMO1P3-201ENST00000439961 304 ntBASIC2.56□□□□□ -2
PNKPQ96T60 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
PNKPQ96T60 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.56□□□□□ -2
PNKPQ96T60 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RNU6-991P-201ENST00000516168 107 ntBASIC2.56□□□□□ -2
PNKPQ96T60 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RN7SKP40-201ENST00000517211 242 ntBASIC2.56□□□□□ -2
PNKPQ96T60 AC136628.3-201ENST00000521868 290 ntBASIC2.56□□□□□ -2
PNKPQ96T60 AC027419.1-201ENST00000522976 328 ntBASIC2.56□□□□□ -2
PNKPQ96T60 AC087441.2-201ENST00000529141 262 ntBASIC2.56□□□□□ -2
PNKPQ96T60 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.56□□□□□ -2
PNKPQ96T60 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
PNKPQ96T60 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
PNKPQ96T60 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
PNKPQ96T60 ZNF658B-202ENST00000615961 3375 ntBASIC2.56□□□□□ -2
PNKPQ96T60 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.56□□□□□ -2
PNKPQ96T60 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PNKPQ96T60 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PNKPQ96T60 RNU6-653P-201ENST00000363074 106 ntBASIC2.55□□□□□ -2
PNKPQ96T60 U8.2-201ENST00000363156 134 ntBASIC2.55□□□□□ -2
PNKPQ96T60 Y_RNA.172-201ENST00000363765 102 ntBASIC2.55□□□□□ -2
PNKPQ96T60 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
PNKPQ96T60 Y_RNA.304-201ENST00000365011 112 ntBASIC2.55□□□□□ -2
PNKPQ96T60 RNU6-1062P-201ENST00000383908 107 ntBASIC2.55□□□□□ -2
PNKPQ96T60 RNU6-918P-201ENST00000391219 106 ntBASIC2.55□□□□□ -2
PNKPQ96T60 PCNPP3-201ENST00000393579 471 ntBASIC2.55□□□□□ -2
PNKPQ96T60 AL357139.1-201ENST00000407792 426 ntBASIC2.55□□□□□ -2
PNKPQ96T60 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
PNKPQ96T60 SUMO1P2-201ENST00000452524 304 ntBASIC2.55□□□□□ -2
PNKPQ96T60 SNORD65B-201ENST00000459126 73 ntBASIC2.55□□□□□ -2
PNKPQ96T60 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.55□□□□□ -2
PNKPQ96T60 YWHAEP4-201ENST00000505390 198 ntBASIC2.55□□□□□ -2
PNKPQ96T60 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
PNKPQ96T60 RNU6-948P-201ENST00000516374 107 ntBASIC2.55□□□□□ -2
PNKPQ96T60 RNU6-861P-201ENST00000516745 106 ntBASIC2.55□□□□□ -2
PNKPQ96T60 MIR4308-201ENST00000580634 81 ntBASIC2.55□□□□□ -2
PNKPQ96T60 AL365434.2-201ENST00000607979 234 ntBASIC2.55□□□□□ -2
PNKPQ96T60 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.55□□□□□ -2
PNKPQ96T60 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms