Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.36□□□□□ -2.03
SNX18Q96RF0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX18Q96RF0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.36□□□□□ -2.03
SNX18Q96RF0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNX18Q96RF0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX18Q96RF0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 RNU6-923P-201ENST00000364753 107 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 RNU6-47P-201ENST00000383866 107 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 SNORA20B-201ENST00000384220 132 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 RNU2-52P-201ENST00000410680 190 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.35□□□□□ -2.03
SNX18Q96RF0 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX18Q96RF0 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
SNX18Q96RF0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX18Q96RF0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SNX18Q96RF0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX18Q96RF0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX18Q96RF0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 RNU6-801P-201ENST00000364087 105 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 RNU1-112P-201ENST00000364401 164 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 SNORA26.5-201ENST00000391215 123 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 RNU6-710P-201ENST00000410424 105 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AC123900.1-201ENST00000420390 96 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AL121890.1-201ENST00000435457 205 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.34□□□□□ -2.03
SNX18Q96RF0 RNU7-26P-201ENST00000458980 63 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 U8.19-201ENST00000459095 133 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AC107393.1-201ENST00000512403 346 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 SNORA70.12-201ENST00000516084 153 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AP002392.1-201ENST00000537692 208 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 MIR3684-201ENST00000579779 74 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 Z83818.1-201ENST00000603584 150 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 FTX_2.1-201ENST00000618816 94 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AL365265.1-201ENST00000621045 234 ntBASIC2.34□□□□□ -2.03
SNX18Q96RF0 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.04
SNX18Q96RF0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX18Q96RF0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 Y_RNA.270-201ENST00000364693 104 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-301P-201ENST00000384277 107 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-493P-201ENST00000391321 108 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 SUMO1P2-201ENST00000452524 304 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 SNORD65B-201ENST00000459126 73 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 RNU6-498P-201ENST00000459468 107 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 AC025647.1-201ENST00000517879 253 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 AC022559.1-201ENST00000520905 205 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 AC136628.3-201ENST00000521868 290 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNX18Q96RF0 AC134026.1-201ENST00000623249 2239 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 AC009487.4-201ENST00000624969 3585 ntBASIC2.33□□□□□ -2.04
SNX18Q96RF0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX18Q96RF0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
SNX18Q96RF0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 Y_RNA.262-201ENST00000364641 102 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 RNU6-407P-201ENST00000365280 104 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 MIR873-201ENST00000401120 77 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 MTCO2P33-201ENST00000402100 465 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 AC016909.1-201ENST00000415916 166 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 COX6CP10-201ENST00000416832 224 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 OOSP1P1-201ENST00000423265 274 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 AC010598.1-201ENST00000510378 103 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 SNORA4.4-201ENST00000515921 135 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 RNU2-34P-201ENST00000516534 121 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
SNX18Q96RF0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SNX18Q96RF0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX18Q96RF0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SNX18Q96RF0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SNX18Q96RF0 SNORA27.1-201ENST00000362604 124 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 RNA5SP126-201ENST00000365092 109 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 Y_RNA.555-201ENST00000384673 110 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 SRIP3-201ENST00000413200 219 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 MTCO1P44-201ENST00000441935 243 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 RPL23AP7-203ENST00000449021 469 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
SNX18Q96RF0 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms