Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SCARNA14-201ENST00000516903 136 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 AC011604.1-201ENST00000545978 196 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 MIR4694-201ENST00000578534 80 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 MIR4769-201ENST00000584126 77 ntBASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.74□□□□□ -1.81
CNTNAP3BQ96NU0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-832P-201ENST00000363319 107 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU1-105P-201ENST00000363470 161 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU1-63P-201ENST00000383902 164 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 MIR577-201ENST00000385196 96 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNA5SP306-201ENST00000411087 107 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 MRPL35P3-201ENST00000421557 364 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU7-164P-201ENST00000459221 62 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RNA5SP179-201ENST00000517284 121 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 AL360157.1-201ENST00000565962 87 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 AC008739.2-201ENST00000597006 317 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 AC091167.4-201ENST00000605079 184 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 AL162274.2-201ENST00000614406 332 ntBASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTNAP3BQ96NU0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 MAPK10-253ENST00000641010 4072 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 SNORD38C-201ENST00000384381 69 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 Y_RNA.531-201ENST00000384589 121 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 MIR767-201ENST00000390228 109 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 MIR1283-1-201ENST00000408494 87 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AC017083.1-201ENST00000428093 483 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AC009238.1-201ENST00000442165 424 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AC009237.6-201ENST00000446969 424 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 S100A11P2-201ENST00000467589 312 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AC113410.1-201ENST00000505029 247 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6-693P-201ENST00000516134 107 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 RN7SKP282-201ENST00000516824 299 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 MIR4777-201ENST00000583710 86 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 MIR5684-201ENST00000585074 65 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 JPX_2.1-201ENST00000614161 69 ntBASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNTNAP3BQ96NU0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 FAM35DP-201ENST00000323387 2712 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.94-201ENST00000363068 106 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-60P-201ENST00000364792 103 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 MIR518F-201ENST00000384973 87 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 AC097463.2-201ENST00000421074 142 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 RPL30P4-201ENST00000429309 333 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 AC068657.1-201ENST00000520807 306 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 MIR4668-201ENST00000582284 70 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 MIR3117-201ENST00000584034 78 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 AL160290.3-201ENST00000604869 165 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 MIR7106-201ENST00000612419 65 ntBASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTNAP3BQ96NU0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AC017071.1-201ENST00000564407 2204 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP374-201ENST00000362939 125 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 SNORD32B-201ENST00000364460 84 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.454-201ENST00000384224 113 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 U8.17-201ENST00000391292 132 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 MIR300-201ENST00000401138 83 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 SNRPGP10-201ENST00000432323 225 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 SNORA31.1-201ENST00000515993 133 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 SNORA31.5-201ENST00000516190 133 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AC004486.1-201ENST00000546846 233 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 U4atac.1-201ENST00000618345 95 ntBASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTNAP3BQ96NU0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms