Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC245060.5-201ENST00000610778 3293 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 AC010615.1-201ENST00000594254 1764 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-505P-201ENST00000384427 107 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 SNORA53-201ENST00000391141 249 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 BX510359.4-201ENST00000423750 193 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC010598.1-201ENST00000510378 103 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC011406.1-201ENST00000512440 370 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-1041P-201ENST00000516254 102 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-1338P-201ENST00000516328 91 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 SCARNA24.2-201ENST00000516968 130 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 MIR3145-201ENST00000580727 82 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC005828.6-201ENST00000606610 232 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 AC127459.3-201ENST00000624328 466 ntBASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDK5RAP3Q96JB5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 RNU1-58P-201ENST00000362413 163 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.237-201ENST00000364439 102 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 AL121890.1-201ENST00000435457 205 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 HMGN2P34-201ENST00000437647 269 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 SUMO1P2-201ENST00000452524 304 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.668-201ENST00000516233 93 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 AP005660.1-201ENST00000522972 293 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 AC004817.2-201ENST00000561794 651 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 DEFB117-201ENST00000602356 141 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 AC037487.3-201ENST00000606668 112 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDK5RAP3Q96JB5 AL359851.1-201ENST00000569460 4997 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 AL391987.6-201ENST00000305671 199 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP450-201ENST00000411206 102 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP508-201ENST00000411327 119 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 RNU2-31P-201ENST00000516954 155 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 AP000942.4-201ENST00000604811 241 ntBASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDK5RAP3Q96JB5 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.124-201ENST00000363339 93 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.418-201ENST00000384029 102 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 MIR17-201ENST00000385012 84 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 RNU11-3P-201ENST00000391111 133 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 RNU2-38P-201ENST00000410856 79 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 AL353689.1-201ENST00000438895 199 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 SNORD127-201ENST00000458892 86 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-1146P-201ENST00000516282 102 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 MIR4287-201ENST00000579398 78 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 AC062037.2-201ENST00000610137 73 ntBASIC2.45□□□□□ -2.02
CDK5RAP3Q96JB5 MTND5P6-201ENST00000422338 1798 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP276-201ENST00000362580 94 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA27.1-201ENST00000362604 124 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-326P-201ENST00000365480 107 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-417P-201ENST00000384712 107 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 MIR873-201ENST00000401120 77 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA11.4-201ENST00000408823 129 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-1132P-201ENST00000459214 107 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RPS27P22-201ENST00000478056 241 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 SERF1AP1-201ENST00000514575 187 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA70.12-201ENST00000516084 153 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 MIR514B-201ENST00000516774 80 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 AC023157.2-201ENST00000540596 141 ntBASIC2.44□□□□□ -2.02
CDK5RAP3Q96JB5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA25.1-201ENST00000362326 128 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 RNU4-80P-201ENST00000363200 141 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.136-201ENST00000363444 102 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms