Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC091895.1-201ENST00000624494 256 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
DDX11Q96FC9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX11Q96FC9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX11Q96FC9 AC069528.2-201ENST00000624849 1991 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX11Q96FC9 U3.8-201ENST00000363675 217 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 RNU6-151P-201ENST00000364158 107 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 SNORA22C-201ENST00000384614 134 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 RNU6-578P-201ENST00000390980 103 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 RNU6-257P-201ENST00000410238 98 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 RPL36AP48-201ENST00000485521 314 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX11Q96FC9 RNU6-313P-201ENST00000516317 112 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
DDX11Q96FC9 AC090616.3-201ENST00000582184 217 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 MIR4635-201ENST00000583759 79 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
DDX11Q96FC9 AC008873.1-201ENST00000625051 138 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 U6.115-201ENST00000636045 103 ntBASIC3.13□□□□□ -1.91
DDX11Q96FC9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DDX11Q96FC9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX11Q96FC9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 RNA5SP68-201ENST00000363885 119 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 RNU6-1154P-201ENST00000391001 104 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 RNA5SP210-201ENST00000391034 120 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 Z98742.2-201ENST00000431564 187 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 MIR3945-201ENST00000581853 98 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 MIR3670-2-201ENST00000582974 65 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 MIR3670-1-201ENST00000584160 65 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 MIR3670-3-201ENST00000584855 65 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 AC069294.1-201ENST00000608397 350 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 MIR3670-4-201ENST00000612260 65 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 uc_338.14-201ENST00000613162 166 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 AL365222.1-201ENST00000614661 98 ntBASIC3.12□□□□□ -1.91
DDX11Q96FC9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX11Q96FC9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX11Q96FC9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX11Q96FC9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX11Q96FC9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 RNU6-899P-201ENST00000363947 107 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 SNORD32B-201ENST00000364460 84 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 Y_RNA.310-201ENST00000365063 113 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX11Q96FC9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 SNORA8.3-201ENST00000384679 139 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 RNU6-417P-201ENST00000384712 107 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 RNA5SP272-201ENST00000516095 111 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX11Q96FC9 MIR3616-201ENST00000584070 92 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 MIR6817-201ENST00000615588 66 ntBASIC3.11□□□□□ -1.91
DDX11Q96FC9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX11Q96FC9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX11Q96FC9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX11Q96FC9 EIF4EP4-201ENST00000424916 578 ntBASIC3.1□□□□□ -1.91
DDX11Q96FC9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX11Q96FC9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
DDX11Q96FC9 SCARNA8-201ENST00000515924 131 ntBASIC3.1□□□□□ -1.91
DDX11Q96FC9 MIR449C-201ENST00000516047 92 ntBASIC3.1□□□□□ -1.91
DDX11Q96FC9 MIR548X2-201ENST00000579776 100 ntBASIC3.1□□□□□ -1.91
DDX11Q96FC9 MIR5688-201ENST00000580619 83 ntBASIC3.1□□□□□ -1.91
DDX11Q96FC9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DDX11Q96FC9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX11Q96FC9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX11Q96FC9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
DDX11Q96FC9 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 MIR526A2-201ENST00000390198 65 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 AC092427.1-202ENST00000430569 476 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 AL513328.1-201ENST00000446460 224 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX11Q96FC9 RNU6-1098P-201ENST00000516772 96 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX11Q96FC9 AC022616.8-201ENST00000533569 253 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 RPL17P51-201ENST00000605218 238 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.09□□□□□ -1.91
DDX11Q96FC9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.92
DDX11Q96FC9 AC010332.2-201ENST00000613083 1904 ntBASIC3.09□□□□□ -1.92
DDX11Q96FC9 AC100821.1-201ENST00000523153 2479 ntBASIC3.09□□□□□ -1.92
DDX11Q96FC9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.09□□□□□ -1.92
DDX11Q96FC9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX11Q96FC9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX11Q96FC9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 Y_RNA.124-201ENST00000363339 93 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 Y_RNA.293-201ENST00000364908 93 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 RNU1-109P-201ENST00000383960 147 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 MIR616-201ENST00000385293 97 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 RNU6-855P-201ENST00000410395 104 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX11Q96FC9 AC107027.2-201ENST00000512197 115 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 RNA5SP148-201ENST00000516527 94 ntBASIC3.08□□□□□ -1.92
DDX11Q96FC9 RNU6-453P-201ENST00000516819 85 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms