Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 HDGFP1-201ENST00000405943 252 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 RN7SKP167-201ENST00000411047 285 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 COTL1P1-201ENST00000422309 375 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 MTATP8P2-201ENST00000435212 202 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 AL161788.1-201ENST00000441805 169 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 AC025518.1-201ENST00000479856 347 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-CQ95604 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-CQ95604 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 SNORA48.11-201ENST00000517015 89 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 AC084364.2-201ENST00000546924 395 ntBASIC3.93□□□□□ -1.78
HLA-CQ95604 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-CQ95604 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-CQ95604 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-CQ95604 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-CQ95604 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-CQ95604 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HLA-CQ95604 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-CQ95604 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR302B-201ENST00000362188 73 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 RNU6-349P-201ENST00000362402 107 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 SNORA2.2-201ENST00000365473 135 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR488-201ENST00000365739 83 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR515-2-201ENST00000384883 83 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR515-1-201ENST00000384884 83 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR590-201ENST00000385008 97 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 MIR802-201ENST00000390235 94 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 RNU6-1275P-201ENST00000391087 107 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 AC017083.1-201ENST00000428093 483 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 RNU6-904P-201ENST00000516206 101 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 AP002004.2-201ENST00000531656 154 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-CQ95604 AL356280.1-201ENST00000603614 379 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 AC012531.5-201ENST00000611375 151 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.92□□□□□ -1.78
HLA-CQ95604 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-CQ95604 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
HLA-CQ95604 Y_RNA.93-201ENST00000363066 109 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 RNU6-442P-201ENST00000383968 104 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 RNU6-301P-201ENST00000384277 107 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 MIR522-201ENST00000385071 87 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 MIR548O-201ENST00000408583 114 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-CQ95604 RNU6-1291P-201ENST00000516591 104 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 RNU7-70P-201ENST00000516941 66 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-CQ95604 AC006386.2-201ENST00000624491 75 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 AC012005.1-201ENST00000624575 75 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 AC110079.1-202ENST00000635213 138 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 MIR376A2-201ENST00000636782 80 ntBASIC3.91□□□□□ -1.78
HLA-CQ95604 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-CQ95604 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-CQ95604 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-CQ95604 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.9□□□□□ -1.78
HLA-CQ95604 MIR340-201ENST00000362125 95 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 Y_RNA.298-201ENST00000364960 107 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 RNY1P6-201ENST00000384193 109 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 MIR450A2-201ENST00000385022 100 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 SNORD96B-201ENST00000386148 79 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AC004552.1-201ENST00000419089 348 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AC244505.4-201ENST00000434905 287 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 SSXP5-201ENST00000443473 287 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AL357552.1-201ENST00000445254 415 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 RPS26P3-201ENST00000470205 348 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AC090543.2-201ENST00000483963 348 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AC004057.1-201ENST00000485827 348 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 Y_RNA.685-201ENST00000516532 108 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 MIR3163-201ENST00000581592 73 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 AC021443.1-201ENST00000604478 211 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 MIR7112-201ENST00000616126 65 ntBASIC3.9□□□□□ -1.79
HLA-CQ95604 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-CQ95604 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-CQ95604 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HLA-CQ95604 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-CQ95604 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HLA-CQ95604 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-CQ95604 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-CQ95604 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-CQ95604 RNU1-15P-201ENST00000353977 144 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 MIR548D2-201ENST00000384955 97 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 FO393413.1-201ENST00000402892 195 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 AC025445.1-201ENST00000502728 300 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 RN7SKP12-201ENST00000516275 143 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 RNU6-830P-201ENST00000516353 107 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 RNU6-711P-201ENST00000517255 106 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-CQ95604 MIR4762-201ENST00000585261 75 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 AC062037.1-201ENST00000605302 128 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 SNORD115-40-201ENST00000606510 82 ntBASIC3.89□□□□□ -1.79
HLA-CQ95604 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-CQ95604 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HLA-CQ95604 AL035425.3-201ENST00000564206 4996 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-CQ95604 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
HLA-CQ95604 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 RNU1-142P-201ENST00000516682 145 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC024995.1-201ENST00000523014 93 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms